Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0218 |
Symbol | |
ID | 8533333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 226041 |
End bp | 227918 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646382596 |
Product | protein of unknown function DUF839 |
Protein accession | YP_003262128 |
Protein GI | 261854845 |
COG category | [R] General function prediction only |
COG ID | [COG3211] Predicted phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAAAA ATATCCTCGC GCTGGCCATT GCCGGCGTCT TTTCGCTCGG TTTGGCCGGC TGCAATAGCT CGGACGATAC AACCGCAAGC GCAACGCCTG AACCTGCCAA CCCAGCACCG ACCGGTACCA CACTGGCAAC CCCGACGGGT GCGGCTCAGA ATGAATTCAT GGTTGCGACC GATTTCACCG TGCCGGGGTA CACAAGTAAC CTCAATGGGG CCTCAGACAC GTTGCAAACA GCTGCGGTCG ATGCGGCCAA AACCCAGCCT TTTGGTTTTC ACAAGCTGGT CGCCACCGGT TACGAAGACA ATAACGAAAC GTTCGGCTGG ATCAAAGATA AAGACAAAAA GGGACTGGTG TTCGCTGATG GCAGCAAATA CATCTGTAAT GGCACCAACC AAGGCGTGGG TTCTGGTTTG GACAACTCAT CGCTGATCAA GCAGGCCGAT GGCAGTTTGC GTCTTGTTGC GCAGTTCGAG TGCCAGGTGG GTGCAATGTA CACCGCCGGT ATCGATCAGG ATGCCGTGAC GGGTGCATTG AGCATGAAGC CAAACAGTCT GCAATTCATC GACCAGTCAT CCGAGTTTGG CGGCTACACC CATTGCGCCG GCATGGTCAC GCCGTGGAAT ACGCATCTGG GCTCGGAAGA GTATGAGCCG AATGCGCGCC TGGACAGCCA GACCTCTGTG GGCAAGACGG ACGACACTTT CTACAACGCC ACTTTCCCGT TCTGGACGGG GTCGGTCGAT TCGGCTCAAA ACAACGATCC AGCCACGGGC ATGAACCCGT ATTTCTACGG CTGGATTCCG GAAGTCAAGG CCGATGGCAC AGGCTTCACC AAGCATTACA GCATGGGTCG TGTATCGCAC GAACTGGCGT ATGTGATGCC GGATCAAAAA ACCGCGTACC TGTCGGATGA CGGCACCAAC GACGGGTTCT ACAAATTCGT GGCTGACAAA GCGGGTGATT TGAGCGCGGG CACTTTGTAT GCGGCCAAGT TCACGCAAAC TGATGCCACG GCTGGCGGTA AGTTCACTCT GAGCTGGATT AGTCTCGGTC ATGCAGACGA TGCCACAATT CGTGCGGAAG TGGCTAAGCG CCCGGTGTTC GATGATTTGT TTGCGACGGC CACACCCGAT GCGACAACCA ATGCCTGCCC TGCCGATTTC ACCCGAATCA ATACCGAAGC GGGCTTGGAG TGCTTGCAAA TCAAAACGGG CATGGATGAG ATCGCTTCTC GCCTGGAAAC CCGTCGTTAT GCGGCCATGA TGGGTGCGAC CACTGAGCTG CGCAAGACCG AAGGCATTAC CTTCGACGCG GCGACGAAAA CCATGTATGT GGCAATTTCC TCAATCGAGC GCGGCATGGA AGATGGGTAT TCCACGGTGA AGAAGACCGA TAAATACGAC AAAGGCGGCA ACAACGATAT TCGTCTGCCA GCCAATACCT GCGGTGCCGT CTATGCACTG CCTGTTGATA CCAACTACAA CGCGACCGCA TGGAATGTGG TGATCGCGGG CACGCCCACA ACCTATGATG CCAACTCGCC TTACACGAAT AACTATTGTG ATGTGAATGG GATTGCCAAC CCGGACAACA TCAACATGAT CCCCGACACC AGTCTGCTGA TGATCGGCGA GGACAGCGGT GCGCACATCA ACAATGTTTA CTGGGCGTAT GACCTCGATA CGAAGTCGCT CAAGCGGGTG TTGACAGTTC CCAAGGGCGC CGAAGTCACC TCTACCTTCT GGTATCAGTT CGGCAACTTC GCTTACCTGA GCGTGGTCGG TCAGCATCCT TTGAAAAAAG AGAGCACCGC GACACCTGAC CAGAAGCAAA CCCTGCTCGG TTACATCGGG CCGTTCGTTA AGAACTGA
|
Protein sequence | MNKNILALAI AGVFSLGLAG CNSSDDTTAS ATPEPANPAP TGTTLATPTG AAQNEFMVAT DFTVPGYTSN LNGASDTLQT AAVDAAKTQP FGFHKLVATG YEDNNETFGW IKDKDKKGLV FADGSKYICN GTNQGVGSGL DNSSLIKQAD GSLRLVAQFE CQVGAMYTAG IDQDAVTGAL SMKPNSLQFI DQSSEFGGYT HCAGMVTPWN THLGSEEYEP NARLDSQTSV GKTDDTFYNA TFPFWTGSVD SAQNNDPATG MNPYFYGWIP EVKADGTGFT KHYSMGRVSH ELAYVMPDQK TAYLSDDGTN DGFYKFVADK AGDLSAGTLY AAKFTQTDAT AGGKFTLSWI SLGHADDATI RAEVAKRPVF DDLFATATPD ATTNACPADF TRINTEAGLE CLQIKTGMDE IASRLETRRY AAMMGATTEL RKTEGITFDA ATKTMYVAIS SIERGMEDGY STVKKTDKYD KGGNNDIRLP ANTCGAVYAL PVDTNYNATA WNVVIAGTPT TYDANSPYTN NYCDVNGIAN PDNINMIPDT SLLMIGEDSG AHINNVYWAY DLDTKSLKRV LTVPKGAEVT STFWYQFGNF AYLSVVGQHP LKKESTATPD QKQTLLGYIG PFVKN
|
| |