| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0205 |
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| Symbol | |
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| ID | 8533320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 209416 |
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| End bp | 210552 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646382583 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003262115 |
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| Protein GI | 261854832 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.130265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAC ACAAACACAC CAGCTTGACC TTGATGCGCA CCACCGCCTT GGCCCTCTTG
GCCATATCGG CCACCGTCTC GACGAACAGC CTAGCCGCCG CTGAGGCATC AAGCCCTACG
GCGATCACCA TCCCTGATGC CATGCGGCCG AATCTGAACG TCAAAACACA GCCCATCGAA
TTTTCAAAAC AAGTCCCCGT AACCCAAGGC ATGGTGACCA TCAGTGCCGC ATCCAGCAAT
CAAGCCAGCA TGCAGGTTTC GGCACCGGCT GATGGCCAAG TGATGGGCAC GTTGCCGCAA
GTTGGGCAGG CGGTGCAGGC AGGTGACATC CTGTTTGAAA TCGCCAGCGC CCAGCTCGGC
GATGCCATGG CGCAATGGCA GATGGCCAAG GCCAAGGTCA CGCTCGCACA ACAAAACCTG
AACCGCGACA CCGCGCTGTT TAAAGACGGG CTGATTGCCA AAAAAAGGCT GGAAGCCACT
CGGGGCGAGG CGCAAATGGC ATCAGCCGAA CTTAAAGCCG CCAGCGCGCG GCTCAAGGCG
GCGGGCGCGG ATAGCTCAGC GCAGAATGGC GGTATCAATC TGGGCGTGCG CGCACCGATC
ACCGGTGTGA TCACGCAACG GATGGTGATG CCGGGCGAAC GCGTCACGAC CGGACAATCC
CTCTTCGATA TCACCGCGAC CCAGGATCAG TGGTGGCTGC TGGCTATTTC ACCGAATAAA
GCACCCGCCG CCGGGCAAAA GGCCGAACTC AAAATCGCCG GCTGCCCTGA ATCCGCCTCC
GTTCAACTGA TGGATCTTGC AGTCGATCCG ACCAACCAAC TTATCACCTT GCGCGCGCGT
CCGAACGCGC CATGCGCGAC CCTCCGGCCG GGTCAAGTCT CGACTGCCAC GCTGTGGGTC
GAGCAAGCCA AACCTGCGGC GTCTCTGCCG ATCAGTGCAC TGACCGAACT TGACGACAAC
ACCCACGTAT TCGTGCAACG CGGCCAGAAT TATTTCTCGA TCCCCGTTAC CCGCGTGGGC
GAAGCCGACG GACAGGCATT CGTGACGGGG CAGTTTGAGC CGGGTGATCG CGTGGTGAGC
TCGGGCATCA GCCAGCTCAA GGCTCTGTCC ATGGGAATGG GCATGGGTGG CGAATAA
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| Protein sequence | MNQHKHTSLT LMRTTALALL AISATVSTNS LAAAEASSPT AITIPDAMRP NLNVKTQPIE
FSKQVPVTQG MVTISAASSN QASMQVSAPA DGQVMGTLPQ VGQAVQAGDI LFEIASAQLG
DAMAQWQMAK AKVTLAQQNL NRDTALFKDG LIAKKRLEAT RGEAQMASAE LKAASARLKA
AGADSSAQNG GINLGVRAPI TGVITQRMVM PGERVTTGQS LFDITATQDQ WWLLAISPNK
APAAGQKAEL KIAGCPESAS VQLMDLAVDP TNQLITLRAR PNAPCATLRP GQVSTATLWV
EQAKPAASLP ISALTELDDN THVFVQRGQN YFSIPVTRVG EADGQAFVTG QFEPGDRVVS
SGISQLKALS MGMGMGGE
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