| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_3210 |
|---|
| Symbol | |
|---|
| ID | 8412763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 3099802 |
|---|
| End bp | 3100212 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645021555 |
|---|
| Product | deoxyribonuclease/rho motif-related TRAM |
|---|
| Protein accession | YP_003179020 |
|---|
| Protein GI | 257389247 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3269] Predicted RNA-binding protein, contains TRAM domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.217613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.112347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAATCT CGGAGAAACT ACTGTGTCTG TTTAGTGCGG AGATCACTGA CGAGGGCGAC
CGCTACACCG TGGAGGTCCC ACAGCGGGAG GTCGACACCG GATCCGTCGA TCCCGGCGAG
ACGTATCGCG TCGCGCTGAT CCGGGCCGAC GAAGCGAGCG AGGAGAGCGA GGAGCCGTCG
CCACAGCCGT CACAGACGCC GTCTTCGGAG CCCCAGCCCC CGGTCGAACC GGGCGAGATC
CGCTACGTGG AGATCGAAGA CATCGGCAAG CAAGGCGACG GCATCGCCCG CGTCGAACGG
GGCTACGTGA TCATCGTCCC CGGCGCTGAG ATCGGCGAGC GCGTCAAGGT CGAAGTCAGC
GAAGTCAAGT CGAACTTCGC CGTCGGCGAG ATCATCGACG AGACCGTCTA G
|
|---|
| Protein sequence | MEISEKLLCL FSAEITDEGD RYTVEVPQRE VDTGSVDPGE TYRVALIRAD EASEESEEPS
PQPSQTPSSE PQPPVEPGEI RYVEIEDIGK QGDGIARVER GYVIIVPGAE IGERVKVEVS
EVKSNFAVGE IIDETV
|
|---|
| |