Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3170 |
Symbol | |
ID | 8412723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 3061290 |
End bp | 3062048 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645021517 |
Product | dihydrodipicolinate reductase |
Protein accession | YP_003178982 |
Protein GI | 257389209 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0289] Dihydrodipicolinate reductase |
TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.275412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGGA TCGCCGTCTG TGGCGCGACC GGCCGGTCCG GGGCCGCGGT CGTCGAGGCC GGACGAGCAC GTGACGACGT GGAGGTCGTC GCCGGCTTCG CCAGCACGGC CGACGAGACG GACGACCTGC CACTGCGTCC CGCCAGCGAG GCCGGCACAG TCCTCGAAGA GTACGACGTG GACGCCGTCG TCGACTTCTC GACGCCCGAA GCGACGATGG ACGTGCTCGC GGGCTGTCTC GACAACGGCG TCGCGCTCGC GGTCGCGACG ACCGGCTTCG ACGAGGCCCA GTCCGAGCGA CTACGCGAGG CCGCCGAGGA GATCCCGGTC CTGAAGGCGA CGAACTTCTC GCGGGGCATC CAGGCGCTCT TGCGGACGGT TCGGGCGGCC GTCGGCGCGC TGGAGGACTA CGACCTCGAA CTCATGGAGA GCCACCACAA CGGCAAGGTC GACGCCCCCT CCGGCACGGC CAACACGATC CTCGAGACCG TCCAGGAGCA GCGCGACGTG GAGCCGGTGT ACGGGCGCGA GGGCCACGCG CCCCGGGCCG ACGACGAGAT CGGCGTCTTC GCCCGCCGTG CCGGCGACAT CCGCGGCGAG CACGAACTGG TGCTGGCGGG CAACGACGAG GTGCTCTCGC TGTCCCATCG CGCCGAGGAC CGCGGCGTCT TCGCCGCGGG CGCGCTCGAC GCGGCCCAGT GGCTCGTCGG CCGCGACCCC GGCTGGTACG ACTTCGGTGC GGTCGTCGAC GACGCCTGA
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Protein sequence | MTRIAVCGAT GRSGAAVVEA GRARDDVEVV AGFASTADET DDLPLRPASE AGTVLEEYDV DAVVDFSTPE ATMDVLAGCL DNGVALAVAT TGFDEAQSER LREAAEEIPV LKATNFSRGI QALLRTVRAA VGALEDYDLE LMESHHNGKV DAPSGTANTI LETVQEQRDV EPVYGREGHA PRADDEIGVF ARRAGDIRGE HELVLAGNDE VLSLSHRAED RGVFAAGALD AAQWLVGRDP GWYDFGAVVD DA
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