Gene Hmuk_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3170 
Symbol 
ID8412723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp3061290 
End bp3062048 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content72% 
IMG OID645021517 
Productdihydrodipicolinate reductase 
Protein accessionYP_003178982 
Protein GI257389209 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0289] Dihydrodipicolinate reductase 
TIGRFAM ID[TIGR00036] dihydrodipicolinate reductase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.275412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGA TCGCCGTCTG TGGCGCGACC GGCCGGTCCG GGGCCGCGGT CGTCGAGGCC 
GGACGAGCAC GTGACGACGT GGAGGTCGTC GCCGGCTTCG CCAGCACGGC CGACGAGACG
GACGACCTGC CACTGCGTCC CGCCAGCGAG GCCGGCACAG TCCTCGAAGA GTACGACGTG
GACGCCGTCG TCGACTTCTC GACGCCCGAA GCGACGATGG ACGTGCTCGC GGGCTGTCTC
GACAACGGCG TCGCGCTCGC GGTCGCGACG ACCGGCTTCG ACGAGGCCCA GTCCGAGCGA
CTACGCGAGG CCGCCGAGGA GATCCCGGTC CTGAAGGCGA CGAACTTCTC GCGGGGCATC
CAGGCGCTCT TGCGGACGGT TCGGGCGGCC GTCGGCGCGC TGGAGGACTA CGACCTCGAA
CTCATGGAGA GCCACCACAA CGGCAAGGTC GACGCCCCCT CCGGCACGGC CAACACGATC
CTCGAGACCG TCCAGGAGCA GCGCGACGTG GAGCCGGTGT ACGGGCGCGA GGGCCACGCG
CCCCGGGCCG ACGACGAGAT CGGCGTCTTC GCCCGCCGTG CCGGCGACAT CCGCGGCGAG
CACGAACTGG TGCTGGCGGG CAACGACGAG GTGCTCTCGC TGTCCCATCG CGCCGAGGAC
CGCGGCGTCT TCGCCGCGGG CGCGCTCGAC GCGGCCCAGT GGCTCGTCGG CCGCGACCCC
GGCTGGTACG ACTTCGGTGC GGTCGTCGAC GACGCCTGA
 
Protein sequence
MTRIAVCGAT GRSGAAVVEA GRARDDVEVV AGFASTADET DDLPLRPASE AGTVLEEYDV 
DAVVDFSTPE ATMDVLAGCL DNGVALAVAT TGFDEAQSER LREAAEEIPV LKATNFSRGI
QALLRTVRAA VGALEDYDLE LMESHHNGKV DAPSGTANTI LETVQEQRDV EPVYGREGHA
PRADDEIGVF ARRAGDIRGE HELVLAGNDE VLSLSHRAED RGVFAAGALD AAQWLVGRDP
GWYDFGAVVD DA