Gene Hmuk_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3042 
Symbol 
ID8412595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2928972 
End bp2929490 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content70% 
IMG OID645021389 
Producthypothetical protein 
Protein accessionYP_003178854 
Protein GI257389081 
COG category[R] General function prediction only 
COG ID[COG2405] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0583282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGGA TCTACGTCGG TCCGACGGCG GTGTACAGCC TCGGGCAGGT CGGCGAACTC 
TCTTTGCTGA CCTCGTTCGA CGGCGACGTG GTCGTACCCA AGCCCGTCCG CGAGGCCTCG
GCCGTCGAGC CGACGGTGAC GAACCTCGAC GAGTTGCTCG ACGGCGACGA CGTGCGAGCG
GTCACCGAAG CCGACGCCGA CATCGAGCGC GCGCAGCGAC TCCTCGGCGA GAAGGACGTG
GGGACGGCGG CGGCGGTGAT CGCGGGGGTC CTGGCGCGTC GGGACTCCGA CGACCGATCG
GCCGTCGCGG TCGTCTCGGA GGATCGGACC GTCCGCCAGA TGTGTCGCGG ACTCGGTGCC
CAGGTCACCA GCAGCTTCGG CGTCGTCGTC CGGGCGACGC TGGAAGACAA GTACCTGAGC
CCGCGACAGG CAAAGCGGAT CGTCCGCCGG ATCGACCAGC ACGGGATGCA TCTGACCGGC
GAACTCCGCG AGCGCGCCGT CGGCGAGATC GGCGACTAG
 
Protein sequence
MSRIYVGPTA VYSLGQVGEL SLLTSFDGDV VVPKPVREAS AVEPTVTNLD ELLDGDDVRA 
VTEADADIER AQRLLGEKDV GTAAAVIAGV LARRDSDDRS AVAVVSEDRT VRQMCRGLGA
QVTSSFGVVV RATLEDKYLS PRQAKRIVRR IDQHGMHLTG ELRERAVGEI GD