| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_3038 |
|---|
| Symbol | |
|---|
| ID | 8412591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2925857 |
|---|
| End bp | 2927152 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645021385 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_003178850 |
|---|
| Protein GI | 257389077 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.25263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0776736 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCG AATCCAAATT CGGCGACTAC GGCGGACAGT TCGTACCCGA GGCGTTGATG
CCGGCCATCG AGGAGCTGAC CGACGCCTAC GAGCGGTACG TGATCGACAA CGAGGACGGC
TTCATGGACG AGTTCCGTCG GCGGCTGGCG GACTTCGGCG GCCGACCCCT GCCCTTACAG
CGGGCCGACC AGCTCTCGGC GCGCTACGAC ACCGAGGTGT ACCTCAAGCG AGAGGACCTG
CTCCACGGCG GGGCTCACAA GCTCAACAAC GCGCTCGGGC AGGTCCTCCT GGCGAAGTAC
ATGGGCAAGG AGCGTATCAT CGCGGAGACC GGTGCCGGGC AACACGGCAC GGCGACGGCG
ATGGCCGCGG CCCACCTCGA CATGCCCTGC GAGATCTACA TGGGCGAGAC CGACATCGCC
CGCCAGCGGC CCAACGTCTT CCGGATGCGG ATCAACGACG CCGAGGTGAA TCCGGTGACG
ACCGGCCGCG GGACGCTCAA AGAGGCGATC AGCGAGACGA TGCGGGACTG GGCGACCACC
GTCGAGACGA CCCACTACGT CATCGGGTCG ATCGTCGGCC CGGCTCCGTT CCCGGCGATG
GTCCGGGACT TCCAGTCGGT CATCAGCGAG GAGGCCCGCG AGCAGATCCA GGAGCAGACC
GGCGGCCTCC CGGACGCCGT CCTGGCCTGT GCGGGTGGCG GCTCGAACAC GATGGGCGCG
TTCCATCACT TCGTTCCGGA CGACGACGTG GACCTCTACG CCGTCGAGGC CGGCGGCTCC
TCGCTGTCGG TCGACGAGGA GGAAGGCGTC GCGCCCAACT CGGCGTCGCT GTCGACCGGC
GACGAGGGGG TACTCCACGG AGCGCGCACG AAGCTCCTTC AGGACTCTGA CGGCCAGATC
ATGGAGTCAC ACTCCGTCTC CGCGGGGCTC GACTACGCGG GCGTCGGTCC GGAACTGGCC
CACCTCGTCG ACGAGGGGCG CGTGACGCCG GTCAACGTCG ACGACGACAC CGCACTTGAA
GCGTTCCACC GGCTCTCCCA GGACGAGGGG ATCATCCCGG CGCTGGAGAC GGCCCACGCG
TTCGGCTATC TGGAGCGCGT GGCGGGACCC GCCACGGACG ATCGAGCGGC GGAGCCGCGA
GATGAGCACC ACGACGAACT GGGCGACACC GTGATCGTCA ACGTCTCTGG CCGGGGGGAC
AAGGACCTCG AAACCGTCAT CGAAGAGACC CAGAAGCGCG ATCTGGACAT CGCGCCGGAC
ATGTCGATCT TCAACGAGAT CGGGGGCGGG ATCTAG
|
|---|
| Protein sequence | MSSESKFGDY GGQFVPEALM PAIEELTDAY ERYVIDNEDG FMDEFRRRLA DFGGRPLPLQ
RADQLSARYD TEVYLKREDL LHGGAHKLNN ALGQVLLAKY MGKERIIAET GAGQHGTATA
MAAAHLDMPC EIYMGETDIA RQRPNVFRMR INDAEVNPVT TGRGTLKEAI SETMRDWATT
VETTHYVIGS IVGPAPFPAM VRDFQSVISE EAREQIQEQT GGLPDAVLAC AGGGSNTMGA
FHHFVPDDDV DLYAVEAGGS SLSVDEEEGV APNSASLSTG DEGVLHGART KLLQDSDGQI
MESHSVSAGL DYAGVGPELA HLVDEGRVTP VNVDDDTALE AFHRLSQDEG IIPALETAHA
FGYLERVAGP ATDDRAAEPR DEHHDELGDT VIVNVSGRGD KDLETVIEET QKRDLDIAPD
MSIFNEIGGG I
|
|---|
| |