| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_3026 |
|---|
| Symbol | |
|---|
| ID | 8412579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2912422 |
|---|
| End bp | 2913081 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645021373 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
|---|
| Protein accession | YP_003178838 |
|---|
| Protein GI | 257389065 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0887478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0112565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTACG ATACCGTCGT GTTCGACAAC GACGGTGTCC TCGTCGGTCG GACCGCCTTC
GACGTTCTTC AGGACGCGAC CCAGGAGACG TTCGAAGCGT TCGGTGTGAC CGATCCGGAC
CCCAACCACG TCGAAAACAT GACAGTGGGA GCGACCCCAC ACCAGGTAGC GACGATCTGT
GGCCAGTACG ACCTCCCACG AGAGGAGTTC TGGCGCGCTC GCGAAGAGAA GATGGTCGAG
GCCCAGCAGG AAGAGGCCCG CGCCGGGCGC AAGCGCCCGT ACGACGACAT CGACACGCTC
GACGGCTTAG ACGCCGCGAA AGGTATCGTC AGCTCGAACC AGCAGGCGAC GGTCGACTTC
CTCCTGGATC ACTTCTCGGT GCGCGATCAC TTCGGCACCG CCTACGGCCG CGAGCCGACG
ATCCAGAGCC TCGACCGGCG CAAGCCAAAC AGCCACTACC TCGACCGCGC GCTGGCCGAC
CTCGACGCCG ACTCCGCGCT GTTCGTCGGC GACAACGAGT CAGACATCCG CGCCGCTGAG
AACGCGGGCA TCGACTCGGC GTTCATCCGC CGCCCACACC GCACGGACTG GGAGCTCAAC
GTCTGGCCGA CGTGGGACAT CGACTCGCTG TCGGACCTCC ACGACATCTG CCGGACCTGA
|
|---|
| Protein sequence | MTYDTVVFDN DGVLVGRTAF DVLQDATQET FEAFGVTDPD PNHVENMTVG ATPHQVATIC
GQYDLPREEF WRAREEKMVE AQQEEARAGR KRPYDDIDTL DGLDAAKGIV SSNQQATVDF
LLDHFSVRDH FGTAYGREPT IQSLDRRKPN SHYLDRALAD LDADSALFVG DNESDIRAAE
NAGIDSAFIR RPHRTDWELN VWPTWDIDSL SDLHDICRT
|
|---|
| |