| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_3018 |
|---|
| Symbol | |
|---|
| ID | 8412571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 2905919 |
|---|
| End bp | 2906545 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645021365 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003178830 |
|---|
| Protein GI | 257389057 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.391362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0253624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTCG ATCGGGTGGC CAGCCACGAG GCGATCGAGG TCGCGGCAGA GCCACGCGAG
GCGGCCGTGA TCGTCCCCGT CGTCACCGAC GCGGGCGACG GCGACGACCA CGCCGTGTTG
TTCACCAAGC GGGCCGACCA CCTCTCGGAC CACCCCGGCC AGATGAGTTT CCCCGGCGGC
GGCCGCGAGC CGGCGGACGA CTCGCTGTTG CGGACCGCCC TCAGAGAGGC ACAGGAGGAG
GTCGGTCTCG ACCCCCGTGC CGCCAACGTG ATCGGGCGAC TGGACGACAT CCGCACCGTC
TCGGAGTACT CCGTCCGACC GTTCGTCGCC AGGATTCCCG ACCGTGAGTA CCAGCCGAGC
GATGAGGAAG TGGCCGAGGT CGTCGTCCTC GCCGTCGACG ATCTCGTCGA TCTGGACAAC
TACGAGTCCG AGCGCCGGGA CCACCCACAC TACGGCGACA TCCGGCTACA CTTCTTCCAC
GTCGACGGCT ACACCGTCTG GGGAGCGACC GCCCGGATGC TCGTCCAGTT GCTCGAACTC
GCGACCGACT GGACGATGCC GACCGAGCCG GACCGCGTGG CCGGCCCCGA CGACGACTAT
CCGCCCAGCG TCCGCGATCA GGTGTAG
|
|---|
| Protein sequence | MEFDRVASHE AIEVAAEPRE AAVIVPVVTD AGDGDDHAVL FTKRADHLSD HPGQMSFPGG
GREPADDSLL RTALREAQEE VGLDPRAANV IGRLDDIRTV SEYSVRPFVA RIPDREYQPS
DEEVAEVVVL AVDDLVDLDN YESERRDHPH YGDIRLHFFH VDGYTVWGAT ARMLVQLLEL
ATDWTMPTEP DRVAGPDDDY PPSVRDQV
|
|---|
| |