Gene Hmuk_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3001 
Symbol 
ID8412554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2884618 
End bp2885712 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content68% 
IMG OID645021348 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_003178813 
Protein GI257389040 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.428168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGCG AGTCGCCCGA GGACCGACGG GACGAGGGGG ACTCGAAAAC GTTGAGCGGG 
GAACGACGCG ACCCGCGAGA CAGCGAGGGG CGCGACGAAC GAAGTGAGGA GCGGTCCTCG
GATACGCGAA CGGGGAGCGA CGCGACCCGT GAGCGGAGTG GCGGTGACGA CGACATTCCC
CTGAACATCG CCGGACACGA AGATCGGGAG GCTCCGTCTG GGACCTCCGA AGACCCCTTC
GACACGGGAG GCGACGACTC GGACGGCGAG TCGGGGGCGG CCGAAGCCGG CGAGGCCGAC
GACGAAGACG ACGAGGAGGA AGTCGAGCCC GTCGAGGTGC TGGTCCAGCT CGCTGACGCG
GGGGAAATCG ACCCGTGGGA CATCGACGTG GTGCGGGTGA CCGACAAGTT CCTCGAAGTG
ATCGACGAGG CGGACTTGCG GACCTCCGGG CGGGCGCTGT TCTACGCGTC GGTGCTGATT
CGCATGAAGA GCGACGCGAT GCTGTCCGAC GAGGACGAGG AAGAACCGCC GGCCGAGCCC
TGGGAGGCGG CGATGGCCGG CGACGATCCC ATCGACGAGC CGGACCCCTT CGCCTCGCTG
GAGCAGGAGA TGGACCGCCG ACTGGAGCGC CGTCGGGCAC GGGGGATGCC CCAGACGCTG
GACGAACTGG TGCGAGACCT CCGGGAGGCC GAGCGCGATT CCTGGTGGAA AGAATCACGC
AGCTACGACA CGAGCGACTC GCCGTCGGGG TTCCAGCGCG GGACCCAGGA ACTGGACTAC
CGCGGGGCCG AAGACGTGCG GATGGACGAC GAGCCGACCG CCGACGAGGT GACGGCCAAC
ACCCACGGCG AGGACATCGA CGCGATCGTC GACGAGGTGT ACGAGGCGGT GCGCGAGCAG
TACGACGCCG GCCGCGAGGA GGTCCTGTTT CGGGAGGTTC ACCAGATCGG CGGCTCCCGG
GTCGAGACGT TCCTGGGACT GCTCTTTCTC TCTCATCGCG GGCAGGTCCG CCTCCAGCAA
GACGAACTGT TCGGGGACCT CTGGATACAG GACCCGAGCG CCGTGACCGG CTCCGAAGAG
GCACTGGCCG ACTAG
 
Protein sequence
MTSESPEDRR DEGDSKTLSG ERRDPRDSEG RDERSEERSS DTRTGSDATR ERSGGDDDIP 
LNIAGHEDRE APSGTSEDPF DTGGDDSDGE SGAAEAGEAD DEDDEEEVEP VEVLVQLADA
GEIDPWDIDV VRVTDKFLEV IDEADLRTSG RALFYASVLI RMKSDAMLSD EDEEEPPAEP
WEAAMAGDDP IDEPDPFASL EQEMDRRLER RRARGMPQTL DELVRDLREA ERDSWWKESR
SYDTSDSPSG FQRGTQELDY RGAEDVRMDD EPTADEVTAN THGEDIDAIV DEVYEAVREQ
YDAGREEVLF REVHQIGGSR VETFLGLLFL SHRGQVRLQQ DELFGDLWIQ DPSAVTGSEE
ALAD