Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2875 |
Symbol | |
ID | 8412427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2760363 |
End bp | 2761025 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645021221 |
Product | ribonuclease H |
Protein accession | YP_003178687 |
Protein GI | 257388914 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.542501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGCGG CCCGTGATCT CCCGTCGGAG TCACTGTCAC CGCTCGCCGA GCGCGTCGAG CGCGTCCTGG CCGCGTACGA CTACGAGGTG TCGGCAGCGA TCGACGCGAT CGACGCGGCG GTCCCCGGCG TCGGCGGACT GTTCGAACCC GGAACCGAGC CGGCGGAGCT GCGAGCGGCG ATCGAACGCG TGCTGTCGGC CGACGACCAC GAGACACGGG TCGATCGCGA CCTGGCCGGC GAGACGGCGA TTCTCTACGT CGACGGCAGC TCTCGCGGGA ACCCGGGGCC GGCGGGCGCT GGTGCCGTCG TGCAGGACGA GGCCGGCGAG TCGCTGCTCC GTCTCGCGCG ACCGGTCGGC TCGCGGACGG ACAACAACAC CGCCGAGTAC GCCGCGCTCG CGCTCGGGCT GGCGCGCCTG CTGGCGCAGT TCGAGCCCGC ACGGATCGAG GTCAGGATCG ACTCGCGGAC GGTCATCCGG AGCGTCTGGG AGGAGCGGGC CGATCCCGGT GCCCAGTTCC GCGAGTACCG AGCGGCCGTC GTCGCGCTAC TCGAACGGGC ACCGGACGAC GACTGGCGAC ACCTCGCGGA CAGCGATCCG AACCCCGCCG ACGCGCTGGC GACGGTCGGG GCCGACATCG CCGCGCTGGG TCCCGGTGGC TGA
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Protein sequence | MTAARDLPSE SLSPLAERVE RVLAAYDYEV SAAIDAIDAA VPGVGGLFEP GTEPAELRAA IERVLSADDH ETRVDRDLAG ETAILYVDGS SRGNPGPAGA GAVVQDEAGE SLLRLARPVG SRTDNNTAEY AALALGLARL LAQFEPARIE VRIDSRTVIR SVWEERADPG AQFREYRAAV VALLERAPDD DWRHLADSDP NPADALATVG ADIAALGPGG
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