Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2828 |
Symbol | |
ID | 8412379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2708342 |
End bp | 2709337 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645021173 |
Product | signal peptide peptidase SppA, 36K type |
Protein accession | YP_003178640 |
Protein GI | 257388867 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.289408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACGA CACGCACGGT CGGGCGACTG TCGCTCGTCG CCGCTGTCAC GGTCGTAGTG GGGGTCGTCG GCTGGCTCGC GTTCTACGTC CTGCCGGGGA GCCTCGCCGA TCTCCTCGGT GTGGTGTTCG TCGTCGTCGC GGTCGTGGCT GGCGTCAAGC TCGGTGGCTC GCTCGCCGGT TCGATCCTGC CCGGCTACAA CGTCGCCGAG GTTGCTGTCG AGGGGCCGAT CAGTCGCGAC GGCGGCGGCT CGCTTGCCAG TCCGCCGGTC GGTGCGCGTG CCGAGGACAT CGTCGAACAG ATCGAGCGCG CCGACGACGA CAGCGCGGTC GACGCGCTGC TCGTCGAGCT GAACACGCCC GGCGGCGAGA TCGTTCCCAG CGAGGACATC CGGCTGGCCG CCGAGCGCTT CGACGGCCCC ACCGTCGGCT ACGCGACGGA CGTGTGTGCC TCCGGCGGGT ACGACATCGC CGCCGGCTGT GACGAGCTCT GGGCGCGCGA GGGGAGCATC GTCGGCTCGA TCGGCGTCAT CGGCTCGCGA GTCAACGCCA AGGAGCTCGC AGACCGGGTC GGACTCTCCT ACGAACAGTT CACCGCGGGC ACGTTCAAAG ACGCCGGGAC CCCACTCAAG GAGTTCGAGC AGGAGGAACG CGAGTATCTC CAGTCGATCG TCGACGACTA CTACGAGCAG TTCGTCGACA CCGTCGCCGA GGGGCGGGAA CTGGACGCCG CCGAGATCCG CGACACCGAG GCCCGGATCT TCCTCGGCAG CGAGGCCCAC GAGCTGGGGC TGGTCGACGA GATCGGGACG CGGCGGGACG TCGAGGCGAA GCTAGAGGAG CAACTGGGCG AGCCGGTCAC CGTCGAGGCG TTCGAGCCGT CCCGCGGGCT GGCCGGCAGG CTCCAGACCG GTGCTCAGAC GGCCGCCTTC GCGCTCGGGG CCGGTGTCGC GAGCGCGTTC GACGGCGATC TCGACGGGCT CTCGTTCCGT CGGTAG
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Protein sequence | MSTTRTVGRL SLVAAVTVVV GVVGWLAFYV LPGSLADLLG VVFVVVAVVA GVKLGGSLAG SILPGYNVAE VAVEGPISRD GGGSLASPPV GARAEDIVEQ IERADDDSAV DALLVELNTP GGEIVPSEDI RLAAERFDGP TVGYATDVCA SGGYDIAAGC DELWAREGSI VGSIGVIGSR VNAKELADRV GLSYEQFTAG TFKDAGTPLK EFEQEEREYL QSIVDDYYEQ FVDTVAEGRE LDAAEIRDTE ARIFLGSEAH ELGLVDEIGT RRDVEAKLEE QLGEPVTVEA FEPSRGLAGR LQTGAQTAAF ALGAGVASAF DGDLDGLSFR R
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