| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2779 |
|---|
| Symbol | |
|---|
| ID | 8412330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2670695 |
|---|
| End bp | 2671675 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645021124 |
|---|
| Product | flap endonuclease-1 |
|---|
| Protein accession | YP_003178591 |
|---|
| Protein GI | 257388818 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
|---|
| TIGRFAM ID | [TIGR03674] flap structure-specific endonuclease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAACG CAGACCTACG ATCGCTGGCG TCGCTCGAAG ACGTTCCCTT CGAGGAGCTG
AGTGACAGCG TCGTCGCCGT CGACGCCCAC AACTGGCTCT ACCGGTATCT CACGACCACG
GTTCGGTTCA CCAGCGACGA GAAGTACACC ACCAGCGACG GGACGGAGGT GGCGAACCTG
ATCGGCGTCG TCCAGGGGCT CCCGAAGTTC TTCGAACACG ACCTGACGCC GGTCTTCGTC
TTCGACGGCG GCGTCACGGA ACTCAAAGAC GACGAGGTCG AGCAGCGCCG CGAGGCCCGC
GAGGCCCGCG AGGAGAAACT CGAAGCCGCC CGCGAGCGCG GGGACTCGAA AGCTGTCGCT
CGGCTGGACT CCCAGACCCA GCGCCTGACC GACACGATCC TCACGACGAC TCGCGAGGTG
CTGAGGCTGC TGGACGTGCC CGTCGTCGAC GCGCCCGCAG AGGGCGAGGC CCAGGCTGCC
CACATGGCAC GCCAGAACGT CGTCGACTAC GTCGGGACCG AAGACTACGA CGCGCTCCTG
CTCGGCGCAC CGCTGACGCT GCGCCAACTC ACCAGCAGCG GCGACCCCGA ACTGATGGAC
TTCCAGGCGA CGCTGGACCA CCACGGCATC ACCTGGGAGC AACTGGTCGA CGCCGCGATC
CTGATGGGGA CGGACTTCAA TCCCGGCATC GACGGTGTCG GGCCGAAGAC CGCGATCAAG
CTGGTGAAAG AGCACGGCGA CCTCTGGGGC GCGCTCGACG CCCGCGACGC CCACGTCGAA
CACGGCGACC GCATCCGAGA GCTGTTCCTC GATCCGGCGG TCACGGACGA CTACGACCTC
GATCTGGCGG TGAACCCGGA CCTTGACGCC GCCCGCGAGT ACGTCACCGG CGAGTGGGAG
GTCGACGAAG GCGAGGTCGC GCGCGCCTTC GAGCACATCG AGGCCAGCGT CGTCCAGACC
GGACTGGACG ACTGGGCCTG A
|
|---|
| Protein sequence | MGNADLRSLA SLEDVPFEEL SDSVVAVDAH NWLYRYLTTT VRFTSDEKYT TSDGTEVANL
IGVVQGLPKF FEHDLTPVFV FDGGVTELKD DEVEQRREAR EAREEKLEAA RERGDSKAVA
RLDSQTQRLT DTILTTTREV LRLLDVPVVD APAEGEAQAA HMARQNVVDY VGTEDYDALL
LGAPLTLRQL TSSGDPELMD FQATLDHHGI TWEQLVDAAI LMGTDFNPGI DGVGPKTAIK
LVKEHGDLWG ALDARDAHVE HGDRIRELFL DPAVTDDYDL DLAVNPDLDA AREYVTGEWE
VDEGEVARAF EHIEASVVQT GLDDWA
|
|---|
| |