| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2727 |
|---|
| Symbol | |
|---|
| ID | 8412278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2613765 |
|---|
| End bp | 2614865 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645021073 |
|---|
| Product | DNA topoisomerase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_003178540 |
|---|
| Protein GI | 257388767 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1697] DNA topoisomerase VI, subunit A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.608904 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.699112 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACTG ACAGCAACCT CAACGAGGCA GAAGCCCGCG AACAGCTACT CGACCTCGCG
GCGGACTTTT ACGACCAGTT CGCCGAAGGC GACGTGCCGA CGATGCAGAT CCCCACCCGG
ACGAAGTCCA ACATCGAGTA CGACGAGGAC AAGGACGTGT GGGTGTACGG CGACCGCTCC
TCGACGCGGT CGGCAAAGAC CGTCTCGGGT GCCCAGAAGC TCCTGAAGGC GACCTACACC
ATCGACTTCC TCGCACAGCA ACTCGAAGAG GACCGCTCGT CGACCCTGCG TGAACTGTAC
TATCTCTCCG AGTCGTGGGA CCTCGACGAG GCCCAGTTCA ACACCCAGGA CGAGTCGAAC
AACCTCATCG AGGACTTGGA GATCGTCTCG GAGGTCAAAC GCGAGGACTT CCACATGCGC
CCAGAGGAGT CGGGCGCGAA GGTGATGGGA CCGCTGCTGT TGCGCGAGCA GACCAGGCGG
GGCGACCGCG AGATCCACTG CCAGGACGAC GTGGGCCAGG GCGGCTACCA GATCCCCAAC
AACCCAGACA CCATCGAGTT CCTCGACAAC GACGCCGACT TCGTCCTCTG TGTCGAGACC
GGCGGGATGC GTGATCGGCT CGTCGAGAAC GGCTTCGACG ACGAGTACGA CTCGATCGTC
GTCCACCTGG GCGGCCAGCC CGCCCGCGCG ACCCGGCGAC TGACCAAGCG ACTTCACGAC
GAACTCGACC TGCCAGTCGT GGTCTTCACT GACGGCGACC CGTGGTCGTA CCGCATCTAC
GGCTCTGTCG CCTACGGCTC GATCAAGTCG GCCCACCTCT CTGAGTACCT CGCGACGCCG
GAAGCCCAGT TCATCGGTAT TCGACCGGAG GACATCGTCG AGTACGACCT GCCGACCGAT
CCGCTCTCGG ACTCCGACAT CAACGCCCTC GAATCGGAAC TGGAGGACCC ACGCTTCCAG
ACGGAGTTCT GGGAGGAACA GATCGAGCTC CAGCTCGACA TCGGGAAGAA GTCCGAACAG
CAGGCACTGG CCTCGCGGGG TCTCGACTTC GTGACCGACA CGTATCTTCC TGAACGGCTG
ACCGAGATGG GCGTGCTGTA G
|
|---|
| Protein sequence | MSTDSNLNEA EAREQLLDLA ADFYDQFAEG DVPTMQIPTR TKSNIEYDED KDVWVYGDRS
STRSAKTVSG AQKLLKATYT IDFLAQQLEE DRSSTLRELY YLSESWDLDE AQFNTQDESN
NLIEDLEIVS EVKREDFHMR PEESGAKVMG PLLLREQTRR GDREIHCQDD VGQGGYQIPN
NPDTIEFLDN DADFVLCVET GGMRDRLVEN GFDDEYDSIV VHLGGQPARA TRRLTKRLHD
ELDLPVVVFT DGDPWSYRIY GSVAYGSIKS AHLSEYLATP EAQFIGIRPE DIVEYDLPTD
PLSDSDINAL ESELEDPRFQ TEFWEEQIEL QLDIGKKSEQ QALASRGLDF VTDTYLPERL
TEMGVL
|
|---|
| |