Gene Hmuk_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2550 
Symbol 
ID8412095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2456778 
End bp2457470 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content53% 
IMG OID645020891 
ProductDNA polymerase beta domain protein region 
Protein accessionYP_003178364 
Protein GI257388591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0464694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTA GCTCGAATAC ATCGGTCAAC GATGGATCGA AGATACTATT CGACATCCCG 
GCTCGAAACT CGGATTTGTT CCGAAGCCAG GCAGCCCACG ATGTCCTTTC TTTTTTGTCC
CGATACCACT CTGAGGAGTT CACGATCACC GAGCTGACCG ACACCGTCGA CTATTCACAG
CCCACTATCT CGAAAGCCGT CGATATTCTC GCAGCAAATG ACCTCGTCAA AGACGAGCGA
GACGGCACGA AACGCTCGGT CCATATCAAC CGTGGCCGAC TATCCCGTCC GGATGACCCA
TTCCTGGACA TCCCGCAAGC AGAGTTCCAC GAACCAGTTC GTGCCGCTGT TGCTGAATTG
CGAACTCAAC TCGACGGTGT CCTCGGGATC GTGTTGTACG GAAGTGTCGC TCGTGGTGAG
GCTGACCGAC GGAGTGACAT TGACCTGTGG GTGCTCGTCG AAGATGACCG GATAGAGCAG
CAACGCTTGG CGAATCGTGT CCGGCAAAAC TTGGAAGACC GAGAATTCGA TACCGGTCGA
TACGCCTACG AAATCGATAT CGAAGCACTC CCTGCCATAC CGAATTACAC TGAAGAAATT
CAGACCATCC TCACCGACGG GCTCGTCCTC TACGACACGG AAAAGTTCGA TACCGTTCTG
CAAATGATCT TCCACGGTGA TCTCGATGAG TAA
 
Protein sequence
MKSSSNTSVN DGSKILFDIP ARNSDLFRSQ AAHDVLSFLS RYHSEEFTIT ELTDTVDYSQ 
PTISKAVDIL AANDLVKDER DGTKRSVHIN RGRLSRPDDP FLDIPQAEFH EPVRAAVAEL
RTQLDGVLGI VLYGSVARGE ADRRSDIDLW VLVEDDRIEQ QRLANRVRQN LEDREFDTGR
YAYEIDIEAL PAIPNYTEEI QTILTDGLVL YDTEKFDTVL QMIFHGDLDE