Gene Hmuk_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2548 
Symbol 
ID8412092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2454169 
End bp2455338 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content67% 
IMG OID645020889 
Producthypothetical protein 
Protein accessionYP_003178363 
Protein GI257388590 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.140695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGTC AGGTCCTCCT CGGGTGTCTG CTCGTGGCCG CGGTCGTGAG CGGGGCCACC 
GTCACGACCG CCCAGGAGAC GGGGTCGAGC GGCCTGTTGG CCCAGCCCGA CGGGTTCGAC
CAGACGACGT TCGAGATCAC GGTCACCGAG AACGGTTCTG CGCGCTGGTC GATCCAGCAC
CACCGTCGGT TGACCAACGA CTCCGAGAAA CGGCAGTTTC GGGACTTCGC CGAGCGCTTC
GAGACCGAGG AGACGGACCT GTACCGGAAC TTCGTCAGTC GCTCCGAGGC GCTGACTGCG
ATCGGCCGCA ACGCCACCGG ACGCCCGATG GCGGCGAAGT CGTTCGACCG CGACGCCTAC
ACGAACGTCA CGGCGAGTTT CGACGCCCGC GGGACGATCG AACTGGCGTT CACCTGGACG
CACTTCGCCC GGACCGACGG GGAGCGGGTC GTCGTCGGCG ACGTGTTCGG CGAGAACTTC
TACATCGGGC CGGACCAGTC GATCGTGTTC GTCAGCGGTG AGGGGCTCCA GTTCGCCGCT
GTCGAGCCCG AACCGACCTC ACAGACCCAG CCCGACTCGC TGACACGGAG CCAGAGTGTC
ACCTGGGAAG GCGAACAGCA GTTCGCACAG CAGCGGCCGT ACCTCGAACT CGAACCGCGT
TCGACCGCGA CGACCCCCGC TGGCGGTTCT GGTGCGGAGA GCGACACGCA GAGCCCGCAG
TCGACGACGG CCCCACTCCC GAGCGGGACC GACAACCCGA TGGTCTGGAT CGTCGGAGCC
GTCATCCTGG TGCTCGGCGT CGGCAGCGCG ATCGCGTACC GAAACGGTTC GGTCTCGCTG
CCCGGCGAAA CCGCGAGCAC CGCCAGCGAC ACCGACACCG CCTCGGAGAC AGCCGGTTCG
GCGACGGACA GCCAGACGCC GATCCCCGAC GAGGAACTGC TCTCGGACAG CGACCGCGTC
GTCAAGCTCC TCGAATCGAA CGGCGGTCGC ATGAAGCAGG TCAACATCGT CGAGGAGACC
GAGTGGTCGA AGTCCAAAGT CAGCATGCTC CTCTCGGACA TGGAGGAGGA CGGCGAGATC
AGCAAGCTCC GCGTCGGCCG CGAGAACATC ATCAGTCTCG CCGGTCACGA ACCCGACGCC
GCCGGCTCGC CGTTCGACGA CGAGGAGTGA
 
Protein sequence
MNRQVLLGCL LVAAVVSGAT VTTAQETGSS GLLAQPDGFD QTTFEITVTE NGSARWSIQH 
HRRLTNDSEK RQFRDFAERF ETEETDLYRN FVSRSEALTA IGRNATGRPM AAKSFDRDAY
TNVTASFDAR GTIELAFTWT HFARTDGERV VVGDVFGENF YIGPDQSIVF VSGEGLQFAA
VEPEPTSQTQ PDSLTRSQSV TWEGEQQFAQ QRPYLELEPR STATTPAGGS GAESDTQSPQ
STTAPLPSGT DNPMVWIVGA VILVLGVGSA IAYRNGSVSL PGETASTASD TDTASETAGS
ATDSQTPIPD EELLSDSDRV VKLLESNGGR MKQVNIVEET EWSKSKVSML LSDMEEDGEI
SKLRVGRENI ISLAGHEPDA AGSPFDDEE