Gene Hmuk_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2443 
Symbol 
ID8411987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2344492 
End bp2345616 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content65% 
IMG OID645020785 
Producttransport system permease protein 
Protein accessionYP_003178259 
Protein GI257388486 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0122218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG AACCCGTCAC CGGAACTGAA CAGTCGAGCG GCACCCGCGA CACCCGTCGA 
TTCGTCTGGT TGCTCGACCC GAAACTCGTG ACGACCGCGA TCGGTAGTGT CGTCATCATC
GTCGTCGCCG GGCTCGTGCA AGTGAGCTTC GGTGCGTACA CGATGAGTAT CGGTCAGGCG
TGGGCAGCCG TGTTCAACCC CGACGTGATC TTTAACCAAC AGGCGTGGCA CGCGTTCCTG
TTGGGCGGGG AGATGCCGGA GATGGGCAAG GAGAGCCTCA TCGTCTGGAA CATTCGCTTA
CCCCGAGTAT TCGTCGGGGC TATCGTCGGG ATGAATCTCG GCGTCTCCGG TGCGATCTTC
CAAGCGATCA CTCGCAACGA ACTGGCGAGC CCGTTCATTC TCGGCGTCTC CTCGGGTGCG
GGACTGATGA TCCTGCTCGT GCTCGTCGTC TTCGGCGGGC TGGCGGCCTT CCTGCCCCTC
ATCGCCGCCG TCGGCGGCGC AGTCGCCTTT TTGATCGTCT ACGCTATCGC CTGGAAGAAC
GGCACGTCGC CGGTCAGGCT CGTCCTCGCG GGCGTGATCG TCGGGACCGT CTTCGGCAGC
GTCCAGACGG GGCTGTTCTT CTTCGCCGAC GACATCGGCA TCGTCCAGTC GGCGATCGCG
TGGACGACTG GGTCACTGAC GGGGACCGAC TGGGAGCAGG TGCGGATGGC GCTGCCGTGG
TCGATCGTCG CGATCCTGCT GGCGATCACC GGCGCGCGGC AGTGTAACGT GATGCTGCTC
GGCGAGCAGA CTGCGAAGTC GCTCGGGATG TCGATCGAGA AGGTGCGGTT CGCGCTCTCG
GGCGTGGCCG TGCTTGCCGC TGCGGCGTCG ATCGCCGTCG CCGGTATCGT CGGCTTCGTC
GGGCTGATCG TCCCGCACAT GGTGCGAAAC CTCGTCGGTA GCGACTACAA GAAGGTGATC
GTCGGCTGTC TGTTCGTGGG CCCCGCGCTG ATGGTCGGCG CTGACGTGGG CGCGCGGCTC
GCGCTCAACC CGGTCCAGAT CCCGGTCGGG ATCGTCACCG GGCTCGTCGG TGGTCCCTAC
TTCCTGTACC TGATGCGAAA GAAGCAGAAC ATGGGAGAGA TCTGA
 
Protein sequence
MSGEPVTGTE QSSGTRDTRR FVWLLDPKLV TTAIGSVVII VVAGLVQVSF GAYTMSIGQA 
WAAVFNPDVI FNQQAWHAFL LGGEMPEMGK ESLIVWNIRL PRVFVGAIVG MNLGVSGAIF
QAITRNELAS PFILGVSSGA GLMILLVLVV FGGLAAFLPL IAAVGGAVAF LIVYAIAWKN
GTSPVRLVLA GVIVGTVFGS VQTGLFFFAD DIGIVQSAIA WTTGSLTGTD WEQVRMALPW
SIVAILLAIT GARQCNVMLL GEQTAKSLGM SIEKVRFALS GVAVLAAAAS IAVAGIVGFV
GLIVPHMVRN LVGSDYKKVI VGCLFVGPAL MVGADVGARL ALNPVQIPVG IVTGLVGGPY
FLYLMRKKQN MGEI