Gene Hmuk_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2397 
Symbol 
ID8411941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2302381 
End bp2303073 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content68% 
IMG OID645020740 
ProductRibonuclease P 
Protein accessionYP_003178214 
Protein GI257388441 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1603] RNase P/RNase MRP subunit p30 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.9766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.743062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCGG CCGTCCACGC CCGTCCGGAC GGGCAGAGTA CGGTCGCCAG GATGGCCCAG 
ACGGCCAGCC GGTACGGCTA CGACGGGATC GTCGTCAGGA ACCACGGCGA CTGCGCGGCG
ACGTTCGACC CCGAAGAGAT CGCCGACGAG TACGACGTGG CCGTCGTCGA GGGAATCGAG
GTCCGGGCGT CTGATCCGTC CCGCGCCAGC GGCCTCGTCG GGAACCACCG GTCGTCCAAG
ACCATCGTCG CGGTCCACGG AGATTCCGTC GCGATCAATC GCTTCGCCGT CGAGCAGCCC
GCCGTCGACG TCCTCGCCCA TCCGACGCGG GGCGACGGCG ACGTGAACCA CGTACTGGCG
AAGGCCGCCG CCGACAACGG CGTTCGCCTC GAATTCTCGC TGCAGGACGT GCTCCACGAG
ACCGGTGGGA CGCGGGTCCG TCGCATCCAG TCGCTGCGGA AACTGCGCGA ACTCGTCGAA
CACTACGACG TGCCCTACGT CGTCAGCGGG GACCCACACA GTCACCTCCA GCTCAGAGCG
CCGCGGGACC TGATCGCGCT GGGCGAGACG ATCGGCTTTT CGCCGGACCA GATCGAGACC
GGACTCAGAG AGTGGGCCGA GCTGACCGAG CGGAACCGCC GTCGGCAGTC GGACGCGTTC
GTCGAACCCG GTGTCTGGCT CGACGACGAG TGA
 
Protein sequence
MYAAVHARPD GQSTVARMAQ TASRYGYDGI VVRNHGDCAA TFDPEEIADE YDVAVVEGIE 
VRASDPSRAS GLVGNHRSSK TIVAVHGDSV AINRFAVEQP AVDVLAHPTR GDGDVNHVLA
KAAADNGVRL EFSLQDVLHE TGGTRVRRIQ SLRKLRELVE HYDVPYVVSG DPHSHLQLRA
PRDLIALGET IGFSPDQIET GLREWAELTE RNRRRQSDAF VEPGVWLDDE