Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2020 |
Symbol | |
ID | 8411551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1923262 |
End bp | 1925187 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645020354 |
Product | hypothetical protein |
Protein accession | YP_003177840 |
Protein GI | 257388067 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.356882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGCG CGACGCCCCG CGAGCGACTC CCGGCGGAGC CGGACCTCCT CGTGGGGCTC GCCGGCCTCG CGGTCGCGGT CGTCCTCTTC CCGCTTCGAT TCCTCTCCGG ACAGCTGTTC ATCCAGGTCC TCCCACCGGT GCTGGGCCTC GGGAGCCTGG TGTATCTCGT CGGACGCGTC CGTGCTGGCG AGTCCGAGCG CGCGATCGAG CGCCGACGCG TCGGCGTCGA CGGGCGTGTC GTCGCGGGCC TCACGGCGCT TGGGATCGGC GGGCTCGCGC TGTTTGGCGC GAGTGCCGGC GGTCGGACGA CGGCGTTCCT GCTGGCCAGC GGGCTCGTCG GGACCGCGAT CCTCGCACAG ATCCTGTTTC TCGACGACGA CGCACTCGAT CCCGGACTCG TGTTGGGCCA GTTGCTCGCG CTGGCGCTCG TCGTCAGGTT CACCGCGTTG CTCTCGACGC CCGGACTGAT CGGCGTCGAC AGCTGGACGC ACCTCACGGA CTACGCGGCG GCCATCCAGT CGACGGACTC GCTGTCGGCG ATCGCCGACG TGAAGTACCG GACTGCGCCG CTCTTTCACG TCCTGGTGGT GATCGCGGCC GACGCCATCG GTGTCGGCCT GCGAGCGGCC ACCTACGTCT CGATGGGGCT CGCGCTCCCG CTGTCGACGC TGCTGGTGTA CGCGATCGGG ACGCTGCTGT TCGACCGCCG CTGGGCGTTG CTGGCAGCGG GCCTGTTCGT GATGGCCGAT CACGTGATCC GGTGGGGCGT CCACATCATC CCGACCAGCA TGGGGCTGGT CTTCTTCCTC GGAGCGCTGG CCGGAGCGAC GCGGCTCCTC GCTGGCGACA CCAGACGCGC CACGTACGCG ATCGTCGTGG CGTTCGGGAT CGCGACCGCG CTGACCCACC AGATCTCGGC GTTCATCCTG CTGGTGGTGC TGGGCGTCGG TGCCGTGGTG GGGTCGCTCG GATCGGTGCT GCCCGGCGAC TTCGACCGCG CGGGGTCGCT GTGGCCGGTC TTCGCGCTCG TCACCGCCTT CGTGGCAGCG CTCTGGTCGA TCACGCCGTA CCGAGACAGC GTGTTCGCCC TGGAACTGCT CGACACCGTC GACCGGGCGA TCGCGACCTC CGTCGGCTTC CTCAACCTCG CCGGGTCGGA TCCGGGCGGC GCGGGCGGTG CCAGCAGCGC TGCGGGCGTC CCGATCGACG TCGCCTTCGC GGACGCGCTC GGCTTCTTCG CGCTGTTTTT CGCGGTCGTG ATCGGGACCG TCGCCGTCTT CCGCCGACGC AACGCCACTC CGGCGACGGT GACCTACGCC GCGGCCGCGG TGGTGCTGGC GACGTTTACC TTCGGACTCC CGCTGTTTGG CTTTACGACC TTCCTGCCCG GCCGCTGGTA CGCGTTCATG TACGTCCCGA TGGCGCTGCT CGCGGCGCTT GGCTGCCGGT TCGCGGTGCG CCGGCTCTCG CCACGGATGG CGATGACCGG CCTGCTCGTG TTCGCGCTGG TGGTCCCCGG TGCGATGGCG ATCAACCACA AGGGGACCCC GGACAGCCCG GTCTTCGACC AGGAGTACTC GACCTACGCC TACGACGAGA CGGAGCTGTC GGCCGTCGAG ACGGTCGGAG CGACGCGGCC CGAAGTGGCC GATCCGGTCT ACACCGACCA CCCCTATCGG ACGGTGTTCG AGCGCAGCGG TGCGACGCCG GCCAACATGC TGGCCGTCGA GGACGGCGAG ATCTACCACG ACACCGTCGT CTACCGGAAG TACCAGTCGA CCGGCGCGCC GGTGCTCCTC GTCGACAACG AGTCGCGGAC GCGCAGGGTC GCACCCTCGG AGGTGTGTCG CGAGGATATG CACCGGCTCT ACGCGAACAG CAACGTCACC GTCTGTACCG GTATCGACGG GATAGACGGA GCATAA
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Protein sequence | MASATPRERL PAEPDLLVGL AGLAVAVVLF PLRFLSGQLF IQVLPPVLGL GSLVYLVGRV RAGESERAIE RRRVGVDGRV VAGLTALGIG GLALFGASAG GRTTAFLLAS GLVGTAILAQ ILFLDDDALD PGLVLGQLLA LALVVRFTAL LSTPGLIGVD SWTHLTDYAA AIQSTDSLSA IADVKYRTAP LFHVLVVIAA DAIGVGLRAA TYVSMGLALP LSTLLVYAIG TLLFDRRWAL LAAGLFVMAD HVIRWGVHII PTSMGLVFFL GALAGATRLL AGDTRRATYA IVVAFGIATA LTHQISAFIL LVVLGVGAVV GSLGSVLPGD FDRAGSLWPV FALVTAFVAA LWSITPYRDS VFALELLDTV DRAIATSVGF LNLAGSDPGG AGGASSAAGV PIDVAFADAL GFFALFFAVV IGTVAVFRRR NATPATVTYA AAAVVLATFT FGLPLFGFTT FLPGRWYAFM YVPMALLAAL GCRFAVRRLS PRMAMTGLLV FALVVPGAMA INHKGTPDSP VFDQEYSTYA YDETELSAVE TVGATRPEVA DPVYTDHPYR TVFERSGATP ANMLAVEDGE IYHDTVVYRK YQSTGAPVLL VDNESRTRRV APSEVCREDM HRLYANSNVT VCTGIDGIDG A
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