Gene Hmuk_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2017 
Symbol 
ID8411548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1918707 
End bp1920659 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content68% 
IMG OID645020351 
Producthypothetical protein 
Protein accessionYP_003177837 
Protein GI257388064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.870621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG AACAGTCTGA CCGTACCGAC AGTAAGACGA CGCTACTGGG CCGCCGCGAC 
GCGCTGAAAG TGCTCGGGGG CACCGCGCTC GTCGGGATGG GCGTCGGGTC CGCGACCGGA
CAGAGCGAGA CCGAGTCGTT CGTCATCGAC GCCAGCGAGG CGACGTGGAG CTACGTCATC
GAGACGACCG GCGACGTGAC GCGCGTCCCG ACCGACGGCG ACGTCGACGA CAGCATCTCC
GACGGGACGA TCCAGGGCAC CGTCTCCTCG GGCCTCGCCG CCTACGAGCT GACGGGCGAC
GTGACGGCGC TGACGATGGA CGGCCCGTCG ACGTTCTCCT TCGGACCCGA CGCCGGGGGG
CAGCTCCGAG AGCGCCACGA GATCGCGATC TCCTCGCCGA CGGAAGTCGC CTACGAGCTG
ACGACCACCG GCGAGATCAC GAAGCTCACG GACGTGGGTA AACTGTCCGC CGAGACCGAG
AACGACGTGA TCACCCAGAA CGACGACGGC ACGTACACCG TCGAAGGCTA CACGGGCAAC
GGCTACGGCG ACTCCTACGA GTTCCCGGGC AGCGTCGTCG CCTTCTCACC GAAAGACGCC
GACGCGAACG TCACGCTCGA CGGGGACTCG ATCTCCCCCT ACGACCTCGT CGGCGAGGAC
GAGCCAAGCC AGACGCTGGC GGTCGTCTCA CAGACGGAGG TTTCCTACGA GTTCACCGTC
GACGGCTCCG TCGAGAAGGT CCTCGACGCC GGCCGGAACT CCGCCGAGAC CGAGAACGAC
GTGATCGCCG AGAACGACGA CGGCACGTAC GCCGTCGCGG GCTACACGGG CAACGGCTAC
GGCGACTCCT ACGAGATCAC GGGCGAGGTG AGCGACTTCG CCCCGGTCGA GGGCGACTAC
ACGCTGTACC TGGACGGTGA CCAGATCGCG CTCTCGGAGC TGACCGGTCA GGAGTCGACG
GACGACTCGA CGGACTCGAC CGATGACGGC GACTCGGACG ACTCGACGGC GTCGACGAGT
CCGGTGATCG GCGGCGGCGA CGGCTACGCG GACGCCGTCG AGCCGGCGCA GGCGACCGTC
ACCGTCGACT CGGTGTCCGA GCTGGTCGAC GCGCTGGGTA GTGCCACCAG TGGCGACGTG
GTCTACGTCG ACGGGAGCGC CGAACTCGAC CTCGGTTCGC GGGACATCAC CGTCCCGGCC
GGCGTCACGC TGGCGAGTGA CCGGGGCGTC GACGGGGCTG CCGGTGGCCA CCTCTACACC
ACGTCGGTCA TGTGGCCGCT GGTCTACGTC TCCGGGGGCG CTCGCGTCAC CGGACTGCGC
GTCAGCGGCC CGAGCTACTC CTACCGCGAG TACGACGCCG ACGCGGTCGA CATGGGACTG
CGGGTCACTG GCAGCGGCGT CGAGATCGAC AACAACGAGA TCTGGGGGTT CACCCACGCG
GCGGTCCGAC CGGCCGGCGA CACGCACGTC CACCACAACC ACATCCACCA CAACCCGATG
GACGGCCTGG GTTACGGGGT CAGCACCACG TCGGGCCAGC CGCTCATCGA GTACAACGAG
TTCAACTACA ACCGCCACAG CATCGCCAGC GGCGGCGGCA ACGGCTACGT CGCCCGATAC
AACTACTTCG GCTCCGCGGC CGTCGACCAC GTGATGGACA TGCACCGACC CGGCGGTACG
ACCATCGAGA TCCACCACAA CACCGTCGAG GCCGTCACAC ACGTTCAGGA CAGCGGCCGC
ACGGAAGCCG TCGCGATCCG GGGGACGCCC AGTGACGTGG CCGACATCCA CGGCAACTGG
TTCTACAACC CCAACGAACC GAAGCCGACG CCCGAGGGCT GGGACGGGAG CGCGATCACA
CAGGTCCACA CCAGCGACTG GCAGAACGTC GAGTTCTGGA ACAACCACTA CGGCAGCGAC
GAGCCGGCAC CGGACATCGG CTGTCCGCGG TAG
 
Protein sequence
MADEQSDRTD SKTTLLGRRD ALKVLGGTAL VGMGVGSATG QSETESFVID ASEATWSYVI 
ETTGDVTRVP TDGDVDDSIS DGTIQGTVSS GLAAYELTGD VTALTMDGPS TFSFGPDAGG
QLRERHEIAI SSPTEVAYEL TTTGEITKLT DVGKLSAETE NDVITQNDDG TYTVEGYTGN
GYGDSYEFPG SVVAFSPKDA DANVTLDGDS ISPYDLVGED EPSQTLAVVS QTEVSYEFTV
DGSVEKVLDA GRNSAETEND VIAENDDGTY AVAGYTGNGY GDSYEITGEV SDFAPVEGDY
TLYLDGDQIA LSELTGQEST DDSTDSTDDG DSDDSTASTS PVIGGGDGYA DAVEPAQATV
TVDSVSELVD ALGSATSGDV VYVDGSAELD LGSRDITVPA GVTLASDRGV DGAAGGHLYT
TSVMWPLVYV SGGARVTGLR VSGPSYSYRE YDADAVDMGL RVTGSGVEID NNEIWGFTHA
AVRPAGDTHV HHNHIHHNPM DGLGYGVSTT SGQPLIEYNE FNYNRHSIAS GGGNGYVARY
NYFGSAAVDH VMDMHRPGGT TIEIHHNTVE AVTHVQDSGR TEAVAIRGTP SDVADIHGNW
FYNPNEPKPT PEGWDGSAIT QVHTSDWQNV EFWNNHYGSD EPAPDIGCPR