Gene Hmuk_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1998 
Symbol 
ID8411527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1902964 
End bp1903251 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content70% 
IMG OID645020330 
ProductRNAse P, Rpr2/Rpp21 subunit 
Protein accessionYP_003177818 
Protein GI257388045 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2023] RNase P subunit RPR2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0296724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG AGATCGAGAT CGCTCGCGAG CGGATCCGAC GACTCCACGA CCTCGCTCGC 
GAGGCGGCCG GCGACGGCAA CGACGAGCGT GCTCGGGAGT ACGTCCGCCG CGCTCGCCGC
GTCGCCGAGC GCAACCGTCT CGGACTCCCG CGGCGGTTCA AGCGTTTCAC CTGTGACGCC
TGCGACGCCT ACCTCCGTCC GAGCGTCAAC GCGCGGGTCC GCCTTCGTGA CGGCCACGTC
GTCGTCACCT GCGACTGTGG GACTCAGGCG CGCTATCCCT ACGAGTGA
 
Protein sequence
MADEIEIARE RIRRLHDLAR EAAGDGNDER AREYVRRARR VAERNRLGLP RRFKRFTCDA 
CDAYLRPSVN ARVRLRDGHV VVTCDCGTQA RYPYE