Gene Hmuk_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1945 
Symbol 
ID8411473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1854890 
End bp1855996 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content65% 
IMG OID645020276 
Productsmall GTP-binding protein 
Protein accessionYP_003177765 
Protein GI257387992 
COG category[R] General function prediction only 
COG ID[COG1163] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTCG AAGAGGAGAT CCGCGAGATC GAAGAGGAAA TCGCCAGCAC GCCCTACAAC 
AAGTCTACAG AGGCTCATAT CGGCCGGCTC AAGTCCAAGC TCGCGGAGAA AAAGGAGAAG
CTCGAACAGC AAGACTCCTC GGGCGGTGGC GGCGGCTACG CCGTCGAGAA ACACGGCGAC
GCCACCGTCG CGCTCGTTGG CTTCCCGAGC GTCGGGAAGT CGACGCTGTT GAACGCCCTC
ACGAACGCCG AGAGCGAGAC GGGTTCCTAC GAGTTTACGA CGCTCGACGT GAACCCCGGC
ATGCTCCAGT ACCGCGGGGC CAACATTCAG ATGCTGGACG TGCCCGGACT GATCGAGGGT
GCGGCCGCCG GCAAGGGCGA CGGCCAGGCC GTGCTCTCGG TCGTCCGGAC CGCGGACCTG
ATCGTGTTCG TCCTGTCGGT GTTCGAGATC GACCAGTACC AGCGTCTCAG CGACGAACTG
TACAAGAACA AGGTCCGCGT CGACCGATCG CCGCCGCGGG TCTCGATCCG CCGCAAGGCC
AAGGACGGGC TCTCGATCAA CGCCAGCGTC GATCTCGATC TCGACGAGGA GACGATCAAG
GGCGTCCTCC GCGAGCACGG CCACGTGAAC GCGAACGTCA CGATCGGCGA GCAGGTCGAC
ATCGACCGGC TCATCGACGG CGTGATGGAC AACCGCGTCT ACGTCCCCTC TGCCGTCGTC
GTCAACAAGG CAGATCTCAT CGAGCCCGAC TACAAGGAGA CCGTCGACGC GCAACTGCGC
GAGTACGACG TCGATCCCGA CGACGCCGTG TTCATCAGCG CCGTCGAAGA GCGTGGACTG
GACGCGCTCC GCGAGCGGAT CTGGGAGGAA CTCGGACTCA TCCGGATCTA CATGGACAAG
CCCGGTCGGG GCATCGACAG GGACGAGCCG CTGATCCTCC GGCGGGGCCA GACCGTTGAA
GACGCCTGCG AGAAGCTCGG CGGCGACTTC GAGGAGCGCT TCCGCTTCGC TCGCGTGAGC
GGCCCGAGCG CCATGCACGA GGAACAGCAG GTCGGCCAGG ACCACGAACT CGAAGACGAG
GACGTGCTGC GGATTCTCAC GGAGTGA
 
Protein sequence
MGLEEEIREI EEEIASTPYN KSTEAHIGRL KSKLAEKKEK LEQQDSSGGG GGYAVEKHGD 
ATVALVGFPS VGKSTLLNAL TNAESETGSY EFTTLDVNPG MLQYRGANIQ MLDVPGLIEG
AAAGKGDGQA VLSVVRTADL IVFVLSVFEI DQYQRLSDEL YKNKVRVDRS PPRVSIRRKA
KDGLSINASV DLDLDEETIK GVLREHGHVN ANVTIGEQVD IDRLIDGVMD NRVYVPSAVV
VNKADLIEPD YKETVDAQLR EYDVDPDDAV FISAVEERGL DALRERIWEE LGLIRIYMDK
PGRGIDRDEP LILRRGQTVE DACEKLGGDF EERFRFARVS GPSAMHEEQQ VGQDHELEDE
DVLRILTE