Gene Hmuk_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1942 
Symbol 
ID8411470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1851910 
End bp1852398 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content64% 
IMG OID645020273 
Productflagella protein 
Protein accessionYP_003177762 
Protein GI257387989 
COG category[N] Cell motility 
COG ID[COG3351] Putative archaeal flagellar protein D/E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA ATCCGCGCGA CTACGATCTC GACGAGTTAC GGAAGATGGC AAAGCAACAG 
CGGCCGGGCA ACGGGATGGG CGACGAGGAG ACGCTCGATC CGGCCGAGCT GGGAATGGCG
ATGGACGAGG GCGGCGACGC TCCCGCGGGC GATTCGTTCC GTGCCGGTCT CTACCGCGAG
CTGCTGCCCT TCCTCGGCTC GGACGGCACG GAGAAGCCGT ATCTGGCGGC GTTGCCCGAG
AACTACGCGG CCGAGTTCGT CGTCTTCGAG TGGCTGGAGT TCCTCCTGAT GCACTCGGGG
TACCAGGGAG CCGAGGAGGC ACTCGACTAC TACGAGGACA TCGACTGGAT CACCGACGAC
GTCCAGTCGT CGCTGTCGGA CTACCTCCGT GGTATCGACG AGTCGGGGAC CAACGACGGT
GCCAGCCTCG ACGTGGACGA TCACATGCTG AGTCTCGTCT ACGTCGCGAA GCTCCACTCG
ATGGCCTGA
 
Protein sequence
MTINPRDYDL DELRKMAKQQ RPGNGMGDEE TLDPAELGMA MDEGGDAPAG DSFRAGLYRE 
LLPFLGSDGT EKPYLAALPE NYAAEFVVFE WLEFLLMHSG YQGAEEALDY YEDIDWITDD
VQSSLSDYLR GIDESGTNDG ASLDVDDHML SLVYVAKLHS MA