Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1691 |
Symbol | |
ID | 8411214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1620031 |
End bp | 1620747 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645020018 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_003177512 |
Protein GI | 257387739 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.319951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.463785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGGA TCGTGTTGCA AAGCAGCGAT TGGCTCTTCG TCGCCAGCAA CGCGGACTTC CTGCTGCTGG GAACGATCGT CACGGTGTTG CTGACGATCA CCAGTCTCTC GCTGGGGTTT CTGGCCGGAT TCCCGATGGG GGCGATCGAG GTGTACGGGC CGGACTCGCT CCGGTCGGTG GTCGGCACCG TCGGCGTCGT CTTCCGTGGT ACGCCGATCG TCGTGCTCGT CGTGGTGCTG TACTTCGGGC TCCCGATCCC ACAGCTTGGC ACCGTGCCGG CGCTCGACAT CCAGGTGACG CCGTTTCTCG CGGCGGCGCT GGCGCTCGGG CTCCGTAGCG GGGCCTACCA GAGCCAAGTG TTCCGGGGCG CGATACAGTC GATCAGCGAA GGTCAGATGG AGGGGGCCCG CTCGATCGGC ATGAGCAAGC TCCAGGCCAT CCGCCACGTG ATCTTCCCGC AGGCGATCCG GCGCTCGATC CCCGGCTTTC AAAACGAGTT CACGATCGTG CTGAAAGACA CCAGCGTCGC CTTCGCGATC GGACTGGCGG AGCTCCTGAC TCGGGCCGAG AACCTCTATC TCCAGCCCGG CCGGGGCACC GCCGTGATGG AGGTCATCCT CACGATCACC GCGATCTACT TCGTGTTGAC CGTCGCGACA AACCGGACGC TCGATCGACT ACACGACCGC TACGCGATCC CAGGAGGCAA CGAATGA
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Protein sequence | MAGIVLQSSD WLFVASNADF LLLGTIVTVL LTITSLSLGF LAGFPMGAIE VYGPDSLRSV VGTVGVVFRG TPIVVLVVVL YFGLPIPQLG TVPALDIQVT PFLAAALALG LRSGAYQSQV FRGAIQSISE GQMEGARSIG MSKLQAIRHV IFPQAIRRSI PGFQNEFTIV LKDTSVAFAI GLAELLTRAE NLYLQPGRGT AVMEVILTIT AIYFVLTVAT NRTLDRLHDR YAIPGGNE
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