| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1624 |
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| Symbol | |
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| ID | 8411147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | - |
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| Start bp | 1544251 |
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| End bp | 1545567 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645019951 |
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| Product | THUMP domain protein |
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| Protein accession | YP_003177445 |
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| Protein GI | 257387672 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.443715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCC TCGACGACGC CCGGGCCGCC GCCGCGACCG GCCCGCTCTG TGACTCCTGT
CTGGGCCGGC TGTTCGCCGA GCGGAGCTTC GGCCTGACAA ACACGGAGCG CGGTCGGGCG
CTGCGGACGA CGATCGCGCT CGACGACGAC GAGCCCTACG ACCCGCCCGA AGACTGCTGG
GTCTGTGAGG GCGAGACGGC GCGGTTCGAC GAACTGGCCG AGCGAGCCGC GGCCGCGGTC
CAGGGCTACG AGTTCGCTAC CTACCAGCTC GGCACTCGGG TGCCGCCGCT GCTGGAGGAG
AACGACCAGC TGCTCCGCGA GGACGTGGGA CTGGACGGTA GCGAGCCCGA CGCCGACCAC
GACGACCGCG AGGCCTTCGC CGGCGAACAG CTCAAGACGG AGTTCAACCG CGAGGTCGGC
CGCCGCGTCG GCGACCTGAC CGGTGGGGAG GTCGACTTCG AGCGCCCGGA CGTACAGCTG
ACGATCGACC TCGCGACCGA CGAGATCGAC GTGCAGGTCA ACTCCGCGTT CGTCTACGGA
CGCTACCGGA AGCTCGAACG GGACATCCCA CAGACGAAGT GGCCCTGCAA CGAGTGTGGC
GCGACCGGGC TCAAGCGCGG CGCGGAGTGT TCGGGCTGTG ACGGCACTGG CTATCGGTAC
CCCGAGAGCG TCGAGCAACT GTCCGCGCCG GTCGTCCTCG ACGCGATGGA CGGCGAGGAG
GCGGTCTTCC ACGGAGCCGG TCGCGAGGAC GTGGACGCCC TGATGCTCGG GAGCGGTCGT
CCCTTCGTCA TCGAGATCAA AGAGCCCCGC CGCCGCGACG TCGACGCCGA CGCCCTCGAA
GCGGAGATCA ACGACTTCGC CGACGGCAAG GTCGAGGTCG AGGGGCTCCG GCGCGCGACC
CACGACATGG TCGCCCGCGT CAAGGAACAC GAGGCCTCCA AGACCTACCG CATGGACGTG
GCGTTCGACG AGCCGATCGA GGAGGTGACG CTCGACGACG CCTTCGCAGC GATCGACGGC
GCGACGATCG AACAGCGCAC CCCCCAGCGC GTCGACCACC GTCGTGCCGA CATCACCCGG
ACTCGCGACG TGTACGACAT CTCGGGCGAA CTCGACGACG CCCGCAACGC CGACATCGAG
GTCCACGGGG CCGGCGGACT CTACGTGAAG GAGCTGATCT CCGGCGACGA GGGCCGCACC
CAGCCCAACC TCGCCGACGA GGTCGGCACC GGCGCGGTCG TGACGGCGCT GGACGTGCTC
GACGTGGAAG GGGAAGCGGA GTCGTTCGAA CAGCCGGAGT TCTTCGTCGA CGCGTGA
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| Protein sequence | MTLLDDARAA AATGPLCDSC LGRLFAERSF GLTNTERGRA LRTTIALDDD EPYDPPEDCW
VCEGETARFD ELAERAAAAV QGYEFATYQL GTRVPPLLEE NDQLLREDVG LDGSEPDADH
DDREAFAGEQ LKTEFNREVG RRVGDLTGGE VDFERPDVQL TIDLATDEID VQVNSAFVYG
RYRKLERDIP QTKWPCNECG ATGLKRGAEC SGCDGTGYRY PESVEQLSAP VVLDAMDGEE
AVFHGAGRED VDALMLGSGR PFVIEIKEPR RRDVDADALE AEINDFADGK VEVEGLRRAT
HDMVARVKEH EASKTYRMDV AFDEPIEEVT LDDAFAAIDG ATIEQRTPQR VDHRRADITR
TRDVYDISGE LDDARNADIE VHGAGGLYVK ELISGDEGRT QPNLADEVGT GAVVTALDVL
DVEGEAESFE QPEFFVDA
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