| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1602 |
|---|
| Symbol | |
|---|
| ID | 8411125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1526962 |
|---|
| End bp | 1527648 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645019929 |
|---|
| Product | TrkA-N domain protein |
|---|
| Protein accession | YP_003177423 |
|---|
| Protein GI | 257387650 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.316093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTCG TTATCGTGGG TGCCGGTCGC GTCGGACTCC GGACTGCTCG CGTGCTCGAC
GACGGCGGGC ACGACGTGGT CCTCGTGGAG AACGACCCCA CGAAAGTAGC GCGTGCCCGC
GAAGAGGGAC ACGACGTGAT CGAGGGCGAC GGTGCGGTCG AGACGATTCT CGACGACGCC
GATCTCGACC GTGCGGACGC ACTCGGCGCG CTGACCGGCG ACCTCAACGA CAACTTCGTA
GCCTGTATGA TCGCCAAACA GTTCGACTGC CGGACCGTGA TGCGCATCGA CGAGGACTAC
CGCGAGGAGA TTTACCGCAA GTACGCGGGC GACGTGGACG AAGTGATCTA CCCCGAGCGC
CTGGGTGCGA TCGCCGCGAA GAACGCCCTG CTGGGCGGGA ACATCCGTGC CGTCGCCGAC
ATCGATCAGA ACCTCCAGCT CGTGGAGTTC ACCATCACCG AGCAGTCGCC GATGCGGGGC
TACTCCATCA GCGAACTCGA ACTGCCAGCC AACGCCCGAC TGCTCGCGTT CGGCAAGCGC
GACGAGCCCC TGGACCTGCC CGGCGAGGAC GAGACACTCG ATCTCGGCGA CCACCTCGTC
GTCCTCGCGG ACTTCGACGC GCTCGGAGAC GTGCGCAGCA TCGTCGTCGG CGAGACCGGA
CGCGCGGCCG CCGTGGGGGG TGCCTGA
|
|---|
| Protein sequence | MRFVIVGAGR VGLRTARVLD DGGHDVVLVE NDPTKVARAR EEGHDVIEGD GAVETILDDA
DLDRADALGA LTGDLNDNFV ACMIAKQFDC RTVMRIDEDY REEIYRKYAG DVDEVIYPER
LGAIAAKNAL LGGNIRAVAD IDQNLQLVEF TITEQSPMRG YSISELELPA NARLLAFGKR
DEPLDLPGED ETLDLGDHLV VLADFDALGD VRSIVVGETG RAAAVGGA
|
|---|
| |