Gene Hmuk_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1576 
Symbol 
ID8411097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1502094 
End bp1503365 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content54% 
IMG OID645019901 
ProductRadical SAM domain protein 
Protein accessionYP_003177397 
Protein GI257387624 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAG AAACTGAGCG GGACCCTGAC GGCGGCTGGT ACGATCGGTT TGTCCAGCTC 
GTCGATGATC AAGGGCACGT CGTCGAGGAA TTCGGGAAAA ATCCAACGCT CAACGAGCTT
CGGGAAGCAG AGCGCCGCCA CAGCACTCGA ATCAACCTCT GGCAACAGGG TCTCGTTTGT
GACGAATGTG GGAATCAAAT TAACGAGCGA TTCAGCGCTC GACAGGACGG ACATCTTCTG
TGCTGGGACT GTGCTACCAG CTCGGAAAGT CACGAACAGG GTGGGCTACG AATTAACGCG
GACCCGACTA AGAGCGTTCT GAGTGAATCG AAGCTCCACA AAAAGAGCCT CTGTGACTAC
GTGATTAACG TCGCAACGGG CTGCCGTCAC GGGTGTAAGT TCTGCTATGT TCCATCGACA
CCAGCGGTCG ACAACCGCGA TGAAATGCTC GATGACCGTG CCGATGTCGA CGACCCACAG
CAAGACTGGG GTGACTACCT GCTCTACCGT GACGATCTCC CCGAGCGTGT TCAGCGAGGA
CTAGAGGAAA CTGACTTCCA GAACTGGAAG ACCACCGACC GTGGGCGGGG TATCGTCATG
CTCTCCAGCG GGACAGACTG CTACCAGGAC CGACGGGCCG CACAGATCAC ACGCGGTTGT
GTTCATGAAC TCATCGAGCA TGATATCCCG ACTCGGATAC TCACCCGCAG TCCGAACGTT
ACCCGCGACA TCGACCTTTT CAAACAGGCC AATGGGTCTC TCACTGTAGG GTCCTCCATC
CCGAGTTTCG ATACATCCTT GATTAGTGTC CTTGAGCCAA ACGCCCCTCC ACCTATGGCT
CGATGGGAGG CACTGAACGA ATTGTTCAAA GCTGGAGTCC CGCGCTTCGT ATCGTTCTCG
CCCACCTATC CGACGATGGG TCGGGAGGAT ATTCACGAGG CACTTAGCTG GTTCTCCGCC
ATTGATCCCG AAGTGGTCTT CCACGAGCCA ATAAACCCTC GTGGGATCAA TTTCGAAATG
TGTATCGAGG CACTGGAGGA CGAGGGATTA GAGTCTGAAG CGGACGAATT CCGAAAACTG
CAGCGTCAAG GGAAATGGGT GGATTACGCG CTCGACCAGA TCGAAATGGT TCGCGACGTA
GCAACTCATT TCGAGAATAT TACTATCCAT ACCTGGCCCG GTCGTGATCT GATTGAGGCA
ACTAACGGCA CTCAGCAAAG GAAATTCAAG CAGATGCGTC GACAGATATC CCCAGAACCG
TTTGCGGAGT AG
 
Protein sequence
MKLETERDPD GGWYDRFVQL VDDQGHVVEE FGKNPTLNEL REAERRHSTR INLWQQGLVC 
DECGNQINER FSARQDGHLL CWDCATSSES HEQGGLRINA DPTKSVLSES KLHKKSLCDY
VINVATGCRH GCKFCYVPST PAVDNRDEML DDRADVDDPQ QDWGDYLLYR DDLPERVQRG
LEETDFQNWK TTDRGRGIVM LSSGTDCYQD RRAAQITRGC VHELIEHDIP TRILTRSPNV
TRDIDLFKQA NGSLTVGSSI PSFDTSLISV LEPNAPPPMA RWEALNELFK AGVPRFVSFS
PTYPTMGRED IHEALSWFSA IDPEVVFHEP INPRGINFEM CIEALEDEGL ESEADEFRKL
QRQGKWVDYA LDQIEMVRDV ATHFENITIH TWPGRDLIEA TNGTQQRKFK QMRRQISPEP
FAE