Gene Hmuk_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1575 
Symbol 
ID8411096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1500976 
End bp1502004 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content52% 
IMG OID645019900 
ProductRadical SAM domain protein 
Protein accessionYP_003177396 
Protein GI257387623 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.47256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG ACGCTGAAAG CGATCAGAGA GGAGTTTCAC AAACCACTGA TCCCACGAAG 
GCCGTTCTTT CGAACTCCGC GCTTCATCAC AAAAATCTCT GTAACTACGT GATCAACGTG
GCCACTGGAT GCACTCACGG ATGCAAATTC TGCTACGTTC CTTCAACACC GAATATTAAG
ACCCGAGGAG ATATGCTCAA AGAAAGAGCA GATGTAGAAG ATAGTCAACG GGAATGGGGA
AGCTACCTAT TATACCGCGA CGATCTCCCC GAACGCCTTG CTCGCAAACT AGACCGAAAG
CAGAAGTGGG AAAATGAAGA CGGTGGCCGC GGTGTCGTCA TGATTTCCAG CGGAACAGAC
TGCTATCAGG ATCGTCGGGC CGCTCAGATC ACCCGGGGTT GTGTTATCGA ACTCGTCAAT
CATGGGCGTC CGGTTCGCAT ACTCACTCGG AGTCCCGCTG TCGTACGTGA CCTAGATGTG
TTCAAAGCCG CAGATGGGCT GGTAACTGTC GGATCGTTGA TCCCGTGCCT TGATGACGAA
CAGGTTCGAT CTATCGAACC CGGCGCACCA GCTCCATCCA CACGACTCAA TGCTCTCGAA
GAGATCAGCA ATGCTGGTGT CCCAGTTTAC GTTTCGATGT CCCCAACGTA TCCGACACAG
GACCGCGAAG ACCTTCGTGA GCAGCTACGG ATATTCAAAG AGCGCCTTGA TCCTGATGTC
GTATTCCACG AACCGATCAA CCCACGTGGA GGCAACTTCG AGATGACTGT TCAGGCCGCT
CGTGACGCAG GACAGGAAGA ACTGGCCAAT GAACTCGAAA AACTCCGAGA CCGAGACAAC
TGGATCGAGT ACTCGAAGCG TCAACTTACC GCTGTAGAGG AGATCGGCGA AGAACTCGAT
ATTCCGATTC ATCTTTGGCC GGATAAGCAG TTCGTAAAGT ACGTGAAAGA GGGTAAAGAG
CACTTCAAAC GCCAGATCGA AAAGAACGAC TCGCCAGAAG ATTACCCACT CGGCCCAACC
TCTGCCTAA
 
Protein sequence
MNIDAESDQR GVSQTTDPTK AVLSNSALHH KNLCNYVINV ATGCTHGCKF CYVPSTPNIK 
TRGDMLKERA DVEDSQREWG SYLLYRDDLP ERLARKLDRK QKWENEDGGR GVVMISSGTD
CYQDRRAAQI TRGCVIELVN HGRPVRILTR SPAVVRDLDV FKAADGLVTV GSLIPCLDDE
QVRSIEPGAP APSTRLNALE EISNAGVPVY VSMSPTYPTQ DREDLREQLR IFKERLDPDV
VFHEPINPRG GNFEMTVQAA RDAGQEELAN ELEKLRDRDN WIEYSKRQLT AVEEIGEELD
IPIHLWPDKQ FVKYVKEGKE HFKRQIEKND SPEDYPLGPT SA