Gene Hmuk_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1558 
Symbol 
ID8411079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1486116 
End bp1486445 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content65% 
IMG OID645019884 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_003177380 
Protein GI257387607 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.320867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.635066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATC AAGTAGATTC CCCGGAGGAA CTGCCGTCGA CCGCAGGCAA ACTCGCCGAA 
CAGTATCCCG ACGTGTGGGA GCAGTACGCC GGTCTCGGAA AGGCCTGCTC CGAGGCCGGC
CCGATCGACG ACGAGACGAA ACGGCTCGTC AAGCTTGCAC TGGCCGTCGG TTCCCAGTCG
GAGGGGGCCG TCCACTCGCA CGTCCGTAGG GGGCTCGAAG AGGACATCGA TCCCGAGGCG
CTCCGGCACG TCGGGCTGCT CTCGATACCG ACAATCGGGT TCCCGAAGGC GATGGCAGCG
ATGAGCTGGA TCGACGACCT CGCCGAGTAA
 
Protein sequence
MTDQVDSPEE LPSTAGKLAE QYPDVWEQYA GLGKACSEAG PIDDETKRLV KLALAVGSQS 
EGAVHSHVRR GLEEDIDPEA LRHVGLLSIP TIGFPKAMAA MSWIDDLAE