Gene Hmuk_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1506 
Symbol 
ID8411027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1434453 
End bp1435730 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content65% 
IMG OID645019832 
Productisocitrate dehydrogenase, NADP-dependent 
Protein accessionYP_003177328 
Protein GI257387555 
COG category[C] Energy production and conversion 
COG ID[COG0538] Isocitrate dehydrogenases 
TIGRFAM ID[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACG ATTACGACAA GGTCGAGGTG CCTGCCGAAG GCGAGAAGAT CGAGGTCGTC 
GACGAGGACA ACGACGAACT CGATATTCCT GAGAATCCGA TCGTCCCCAT CATCCACGGG
GACGGCATCG GGAAGGACGT GGGACCGGCC GCCCAGAAGG TCCTGGAGGC CGCCGCGAAC
GCCACAGGCC GCGAGATCTC GTGGATGCGC GTCTTCGCTG GCGAGTCCGC CCGAGAGAAG
TACGACGAGA ACCTCCCCGA CGACACCGTC AACGCGATCG ACGAGCACCG CGTCGCCATC
AAGGGGCCGC TGACGACCCC GGTCGGCGCT GGCTTCCGCT CGCTCAACGT CGCGCTGCGC
CAGACGCTCG ACTTCTACTC GAACGTCCGA CCGACCTACT ACCTCGACGG CGTCCCGTCG
CCGATGAAAG CGCCCGAGGA GATGGACATG GTCACCTTCC GTGAGAACAC GGAAGACGTC
TACGCCGGCA TCGAGTGGGA GGCCGGCACC GAAGAGGTCG AGCAGGTCCG GGAGTTCGTC
GAGGAGGACA TGGGCTTCGA CGACGTGATG CACGACGGCC CGATCGGCAT CGGCATCAAG
CCGATCACCG AGTTCGGTTC CAAGCGGCTG GTCCGCAAGG CCATCGACTA CGCCATCGAG
CACGACCGCG ACAAGGTCAC GCTCGTCGGC AAGGGCAACA TCATGAAGTT CACCGAGGGC
CAGTTCACCG AGTGGGGCAT GGAAGTCGCC GACGAGGAGT ACCCCGACGA CGAGGTCTTC
GCCGCGCCCG ACTCTCTCTG GGAGACCCAG GACGAGATCG ACATTCCCGA GGACGCCGTC
ATGGTCGAGT CCAGACTCGC CGACGCGATG CTCCAGTGGA TGCAGCTCCG GACCGACGAG
TTCAGCGTTC TCGCCATGCC GAACCTCAAC GGCGACTACC TCTCGGACGC CGCCGGCGCA
CAGATCGGCG GCCTCGGCAT CGCGCCCGGC GCGAACTTCG GTGACGCCCG CGTGCTCGCA
GAGCCCGTCC ACGGCTCGGC CCCGAAACGC GCCGGCCAGA ACATGGCCAA CCCGACCGCG
ATGATCCTCT CGGGCCGTCT GATGTTCGAC TACATGGGCT GGAAGGACGC AGCCGACCTC
GTTCGCGACG CCGTCGAGGA GACGATCTCC TCGGGCACGG TCACCTACGA CCTCGAACGC
CAGCTCGAAG ACGCCGAGAA GCTCGGCACC GAGGAGTACT CGGACGCCAT CGTCGAAAAC
ATCGAAAAGT TGGCCTAA
 
Protein sequence
MSYDYDKVEV PAEGEKIEVV DEDNDELDIP ENPIVPIIHG DGIGKDVGPA AQKVLEAAAN 
ATGREISWMR VFAGESAREK YDENLPDDTV NAIDEHRVAI KGPLTTPVGA GFRSLNVALR
QTLDFYSNVR PTYYLDGVPS PMKAPEEMDM VTFRENTEDV YAGIEWEAGT EEVEQVREFV
EEDMGFDDVM HDGPIGIGIK PITEFGSKRL VRKAIDYAIE HDRDKVTLVG KGNIMKFTEG
QFTEWGMEVA DEEYPDDEVF AAPDSLWETQ DEIDIPEDAV MVESRLADAM LQWMQLRTDE
FSVLAMPNLN GDYLSDAAGA QIGGLGIAPG ANFGDARVLA EPVHGSAPKR AGQNMANPTA
MILSGRLMFD YMGWKDAADL VRDAVEETIS SGTVTYDLER QLEDAEKLGT EEYSDAIVEN
IEKLA