Gene Hmuk_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1348 
Symbol 
ID8410868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1273753 
End bp1274733 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content74% 
IMG OID645019679 
Productbeta-ribofuranosylaminobenzene 5'-phosphate synthase family 
Protein accessionYP_003177176 
Protein GI257387403 
COG category[R] General function prediction only 
COG ID[COG1907] Predicted archaeal sugar kinases 
TIGRFAM ID[TIGR00144] beta-RFAP synthase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0110253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACGG TGACGACGGC GGCGCGACTC CACTTCGGCT TCCAGAACCT CGCGCTCGCC 
AACGAACGGT TGTACGGCGG CGTCGGCGTC GCCCTCGACG AGCCACTGCT GGTCCTCGAC
GCCCAGCCCG CAGACGAGAT CGACTGCGAC GACGGCGAAG CCAAATCGTA CGTCCGGCGA
GCGGTCGCGA CGCTGGGCGT CGAAGGGGCT CGCGTCTCGG TCCGCGAGCG GCTGCCACGC
CACGTCGGCT TCGGCAGCGG GACCCAGCTC GCGCTGGCGG CGGCCGTCGC GGTCGCGCGG
GCCTACGACC GCGAAGTCCA ACCGCGCTCG CTCGCGCCGG AGCTCGGTCG CGGCGGTCGC
AGCGGCGTCG GCGTCGCGGC CTTCGAGTCC GGCGGGTTCG TCGTCGACGG CGGCCACCCG
ACGGAGCGGT TCACTTCCGA GCCCCCAGCC AACGGCGACT GGACGGTCCC GCCGGTAATC
GCGCGCCACG AGCTCCCCGA CGACTGGCGG TTCGTGCTGG TCGTTCCCGA CGCGGAGCCG
GGGGCCAGCG GGGCCGAGGA GGACCGCCAC ATGCGCCAGG CCGTCGAGCG GGCCGATCCC
GGTATCGCCG ACGACGTGGC CGCGACGCTG ACCCGGACGC TCCTGCCGGC CGCCGCGGAG
GGTGACCACC GGCAGTTCGG GACCGCCGCA GCCCGGATCG GACGGCTCAA CGGAGCCTGG
TACGCCGACG AACAGGGCGG GGTCTACCGC CCGCCGGCCG GCCGGATCGT CGAGCGACTG
GCCCAGCAGC CGACCATCGC CGGAGCCGGC CAGTCATCGT GGGGACCGGC GGTGTGGGGG
CTGACGACGC GTGGCGACGT GGAGGCGGCC AGGACGGGCG TCGAGATGGC CCTGAGCGAC
CTCTCGGTCG ACGCCGACGT ACTGGTCGCC AGCCCACGCA ACGTGGGCGC GACGGTCGAG
GACGGGCCGA CGCTCGGCTG A
 
Protein sequence
MVTVTTAARL HFGFQNLALA NERLYGGVGV ALDEPLLVLD AQPADEIDCD DGEAKSYVRR 
AVATLGVEGA RVSVRERLPR HVGFGSGTQL ALAAAVAVAR AYDREVQPRS LAPELGRGGR
SGVGVAAFES GGFVVDGGHP TERFTSEPPA NGDWTVPPVI ARHELPDDWR FVLVVPDAEP
GASGAEEDRH MRQAVERADP GIADDVAATL TRTLLPAAAE GDHRQFGTAA ARIGRLNGAW
YADEQGGVYR PPAGRIVERL AQQPTIAGAG QSSWGPAVWG LTTRGDVEAA RTGVEMALSD
LSVDADVLVA SPRNVGATVE DGPTLG