Gene Hmuk_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1333 
Symbol 
ID8410853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1260245 
End bp1261792 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content68% 
IMG OID645019664 
Producthistidine kinase 
Protein accessionYP_003177161 
Protein GI257387388 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.319012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.955158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCCC GCATCTACTA CAGCGGTCTC CTGATCGCCG GGATCGGGTT CTTTCTCACG 
CGTTTTACCG TGACCCTCGC GATCGACGGA CAGCCGCTCC AGTTCTACCT AGCCGGGGTC
GTCCCGCTCG TGCTCGGGCT GGGTCTGTCG GCGTTCGGAG TCTCTCTGAG CGTCGTCGGC
CCCGACCGCT CGTTCGTCCG GACGGTCGCA CTGTGGTGCG TGCTCGGGAC CGTCGGGATG
TCCGTCCTCG TCGTCCTCAC GCTGCTGGGG TCGGCCGTCG AGGGGTCGAT GATCGAGGCC
GTGCGGGCGG AGCGACGGCT CGCAACCTTC CTCATAGGCG GCAGCGTCGG CGGCACGCTC
ACGGGCCTCT ACGCGGCGCG GAACCGGCAA CAGCGAACCG TGCTCCGCCA GCAGACGAAC
CGCCTCGTGA CCCTCAATCG GATGCTCCGT CACGAGGTGC TCAACGCCCT CACGCCGATC
CGTGGGTTCG GGACTGCTCG GGAGGACGAG AATCCCGACG CCGGTGAGAT CGTGTCAGAG
CGGGCCGACG ACATCGAGGC GGCGGTTGGA GAGGTCAGCT ACCTCACGAA ACACGCCGGC
GACGGGCAGG CGGTCAACAC CCCCGTCGAT CTCGGACCGC GTCTCACCGA GAGCGTCGAG
GCTATCGAGG ACGAATACTC CGACGCCAGC GTCGTGCGAG CGGACGCTCC AGACGACCTG
GAAGTGCGCG CAAACGCACG GCTCTCGGAC GTGTTTGGGC AACTTCTCCG GAACGCTGTC
GTCCACGCCG ACGACGAGAT GCCTCGGATC GAAGTCGAGT CGACCCGAGA GACCGCCCGA
GTCAGCGTGG TCGACGACGG CGAGGGACTC CCGGAGAGCC AGGAGCGACT GCTCGAGACG
GGCGACATCG AGGAGTTCGA CGATCCGCGG ATGGGGTACG GGCTCAACGT GGTCCGGCTC
CTCGTCGAGA GCTACGGCGG CGAGATCGAG GTCGAGCGCA GTGGCGGCGA GACCTGGATT
ACCGTCGTCC TCGCGCGGGC GGTCGAGTCG AGCACGCCGT CGGCCGACCG GGCGCGCCCG
AACCGACTCC GGCCCGGAAT GCCGAACCTG CTAGTCACGA TAGTCGCGTC GCTCTTGGCG
GGCGTCGCGT ACGGTCTCGT CTCGGAGTTC CTCGGCGGGT CGGTCGCCGG GATCGGCGTC
TTCTACGGGG CGGCGGACCC CGTCGTGGGC TGGCTCACCC ACGAGTTCCA CAGCGTCGTC
TTCGGGTTCG TCTTCGCGAG CCTCCTCTCG TTCGTGCCGC CGTCGTACCG TGACCGGATG
CTAGCGAGCC TCGCGGTGGG CGTCGGGTGG GGACTGGCAC TGTGGCTCGT CGCGGCGGGG
GTCGTCGCTC CCATCTGGCT GCGACTGCTC GGGATCGAAG CCCCCTTGCC GAACGTGACG
GCCCTGTTCT TCACGACCCA CCTCGCGTGG GGACTCTCGC TTGGACTGCT GACCGTCCTG
GGCGAACAAA CTGTCGTCCC GTGGTTCATG CGGTGGCGCG ACCGCTGA
 
Protein sequence
MTSRIYYSGL LIAGIGFFLT RFTVTLAIDG QPLQFYLAGV VPLVLGLGLS AFGVSLSVVG 
PDRSFVRTVA LWCVLGTVGM SVLVVLTLLG SAVEGSMIEA VRAERRLATF LIGGSVGGTL
TGLYAARNRQ QRTVLRQQTN RLVTLNRMLR HEVLNALTPI RGFGTAREDE NPDAGEIVSE
RADDIEAAVG EVSYLTKHAG DGQAVNTPVD LGPRLTESVE AIEDEYSDAS VVRADAPDDL
EVRANARLSD VFGQLLRNAV VHADDEMPRI EVESTRETAR VSVVDDGEGL PESQERLLET
GDIEEFDDPR MGYGLNVVRL LVESYGGEIE VERSGGETWI TVVLARAVES STPSADRARP
NRLRPGMPNL LVTIVASLLA GVAYGLVSEF LGGSVAGIGV FYGAADPVVG WLTHEFHSVV
FGFVFASLLS FVPPSYRDRM LASLAVGVGW GLALWLVAAG VVAPIWLRLL GIEAPLPNVT
ALFFTTHLAW GLSLGLLTVL GEQTVVPWFM RWRDR