Gene Hmuk_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1271 
Symbol 
ID8410791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1200914 
End bp1202056 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content66% 
IMG OID645019602 
Producthypothetical protein 
Protein accessionYP_003177099 
Protein GI257387326 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.486206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACACC GGTTACGAGC CGCCCACTTC GCCCTCCTGC TGGTGGTGCT CTCGGCACCA 
GTTGCGGCCA CCAGTGGCGT GGTCGGCGGT GTCGACGCCC AGCAAACGCC CCCGCCGACA
GCGTCGTCGA CCGCCAGCCA CACGACGATC CTGATACAGC TTCGGTCTGA CGGTAACGCC
ACGTTTTCTG TCACCGCCAG TGGCTTCGAC GTCGCGAACG AGCAGGAGCG AAACAGTTTC
AAAACGACGG CAGAGCGGTT CACCGAGGGC GAAGCGGACA CGCTCGGGCT GTCGGCGTTC
CGGCGGGCGA ACGCGGCCGC GAGCGAAGCG ACCGGCCGCC CGATGGAACT GCGCGACGTA
CGACGAAGCA GCAATCTCAC CAACGGGACG CTGACGCTGT CCTTTACCTG GACCAACTTC
GCGCGCTCGG AGGGTGAGAC CCGGTACGTC GACGACGTGT ACAACACCAC GGATCCCTGG
CTGACCGGCC TGGAAGCGGA CCAGACGCTC GTCCTCGAGT TGCCGCCGGG AGCCGGGATC
CGGACAGTCC CGAAACAGGT GCGGGACGGC CAGATCGTCT GGGAGGGTCC GACGACGTTC
ACGGAGTCCG AACTCGAACT CGCCTACACT CCCGGAGCGG AGGGACCCTC TAACTCGCCG
TCGTCCCCCG GTGGAGGCCC CGATGGGGAC CCCGACGGCG GGTCGTCGCT GCTCTGGGGC
GGGCTCGCCC TGTTGGGTGC CGTGGTCGCC GCCTCCGGCG TCTACGTGCT GTTGCTTCGG
GACGACAGCG TCATCGACCG CGACGCGTTC GACGCCGGTC CCCTCGCGAC CGAGTCCGAG
GACGACGGGG ACGAGCCGCC TGCGACCGTG CCGACGGCGG CCCCGGCAGA GACCGACGAA
GCGCCCGACC AGGAAATCGA CGAAGAGCTG CTCAGCGACG AGGAACGCGT CGAACTGCTG
CTGGAGCGCA ACGGCGGACG AATGAAGCAG GCGAACATCG TCAAAGAGAC CGGCTGGTCG
AACGCGAAAG TCTCACAGCT GCTCTCTTCG ATGGAAGAGG ACGGCCAGAT CGACAAGCTC
AGGATCGGAC GCGAGAACCT GATTTCGTTC CCGGACGAGG ACGTCACGGA CATCGAGAAC
TGA
 
Protein sequence
MSHRLRAAHF ALLLVVLSAP VAATSGVVGG VDAQQTPPPT ASSTASHTTI LIQLRSDGNA 
TFSVTASGFD VANEQERNSF KTTAERFTEG EADTLGLSAF RRANAAASEA TGRPMELRDV
RRSSNLTNGT LTLSFTWTNF ARSEGETRYV DDVYNTTDPW LTGLEADQTL VLELPPGAGI
RTVPKQVRDG QIVWEGPTTF TESELELAYT PGAEGPSNSP SSPGGGPDGD PDGGSSLLWG
GLALLGAVVA ASGVYVLLLR DDSVIDRDAF DAGPLATESE DDGDEPPATV PTAAPAETDE
APDQEIDEEL LSDEERVELL LERNGGRMKQ ANIVKETGWS NAKVSQLLSS MEEDGQIDKL
RIGRENLISF PDEDVTDIEN