Gene Hmuk_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1250 
Symbol 
ID8410770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1183248 
End bp1185305 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content68% 
IMG OID645019582 
Producthypothetical protein 
Protein accessionYP_003177079 
Protein GI257387306 
COG category[S] Function unknown 
COG ID[COG3253] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.249744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGCT TCCTTAGGAT CGAAGCAGTA GCTACGGTCA TGAAACGAGA GCCGCCACAG 
ACCGAAGAGG GCTGGTACGT GTTGCACGAC CTGCGCCACG TCGACTGGGA CGCCTGGCGG
GCGGCCCCCG AACGGGACCG CGACCGAGCG TTGACCGACG GGATCGACTA TCTGGAGTAC
TTCGAGGCCG TCGAGGACAG TTCGGAGGGG CAGTCGGCGG TCTACACCGT GCTGGGCGAC
AAGGCCGATC TCATGATCTT GCACCTGCGG CCGACGATGG CCGACCTGGA CGCCGCCGAG
CGGCAGTTCG AGCAGACCGA GTTCGCCCGC TACACCGAGC AGGCCACCTC CTACGTCTCC
GTGACGGAGG CCTCGGGCTA CACCGAGAAG GCCCGCGAGT ACTTCGACGG CGAGGTCGAC
GACGACTCCG GGCTGGCACA GTACATCCAG GCCCGTCTAC ACCCCGACAT CCCCGACGAG
GAGTTCGTCT GCTTCTACCC GATGAGCAAG CGTCGCGAGC CGGACCAGAA CTGGTACGAC
CTGCCCTTCG CCGAGCGGGC CGAACACATC AAGCGCCACG GTGACATCGG CCGTCAGTAC
GGCGGCAAGG TCGAGCAGAT GATCGCCGGC TCGATCGGCT TCGACGACCA CGAGTGGGGG
ATCACGCTCT GGAGCGACGA CATGACCCAC GTCAAGGACC TGCTGACTCA GATGCGCTTC
GATCCCTCGA CCTCGAAGTT CGCCGACTTC GGGCGCTTCT ACGTCGGTCG CCGATTCGCG
CCGTCGGACC TGCCGGCGAT GATGAACGGC CAGCGCGTCC CGTCCGCGGG CGCGAACGCA
TCGGGAGCGA CGACCGACGG ACGCGCCCAG CCCACCGACG GAGACCATCC CGGTACCCGC
GAGACCGCGA CGGCCGGCCA GTCCGGCGAC GCGGGCAGTC ACGGCGGCGT CCATCCGGGC
AGTTCCGCCG AGGGCGACCA CCCCCACGAC GGCGGCGACG TGGCCAGCCG AGACGGGGAA
GCCGACGAGG CGAGCGAGAG CGGCGACGGC CACCCCGATG GCGGCGGCCG TCCAGACCCC
GGTGACGCGT CCTACGAGGA GACCGACGAC CTCGCACAGC GCCTCGCCAC GATGGGGCTG
TCCGAGGGCG AGGACTACGA CGCTGGCGAC TACGGACTGC TGTTCTACTC GGAGAGCGAC
GCCGAGGCAC TGGCCGACGA AGTCGCGGAT CTCCGGGAGA GCTTCGACCA CTACGACCGC
CACGTCGCGA CGACCGTGCG CGCCCAGAGC GGCCGGGCGG CCGTCGTGAG CATCTGGACC
GCACAGGAAG CCGCCGAGAC CGCCGCCGGG TTCCTGGGCG ACGTGTCCGG GGTCAGCGAC
ACCTACGGGG GCCGCCTCGG CGAGGGAGCC GCCGACGAGC CCGAGCCGAC GACGGCGAAC
TCCAGCGAGG AGATCCAGCA GCAACTTGCC GATGCAAACG TCTACGCCGG ACAGCCGAAC
GGAGAGGACG TGTTCGCGCT GGTGCTGTAC TCCGAGGCCG ACCCCGAGAC GCTGTCTACC
GAAGTGACCG AGCTCACGGA GAGTTTCGAT CACTACGACA CACACGAGGG CACTGCGGTC
TACGAGGCCG GCGAGCCCCT CGACGCCGCG ACGGCGGACG CCGACCAGCC CCGAGCGGCC
GTCGTCAGCC TCTGGGAGAC CCAGAGCGCC GCCGACACGG CGAGTGGCTT CCTCACCGAC
CTCCCGGGGA TCGTCGGCCG CCCCGACGAG GGCGACGGTT TCGGCACGAT GGGGATGTTC
TACACCGTCG AGCCGGACCA CCGCGAGGAG TTCGTCGAGA CCTTCGACGA GGTCGGCGAG
CTACTCGACG AGATGGACGG CCACCGAGAG ACGACGCTGC TGGCGAACCG CGACGACGTG
AACGACATGT TCATCGCGAG CCAGTGGGAC AGCAAGGAAG ACGCGATGGC GTTCTTCCGG
TCGGACGAGT TCGCCGAGAC CGTCCAGTGG GGCCGAACAG TGCTCGCAGA CCGTCCTCGG
CACGTCTTCC TCGCCTGA
 
Protein sequence
MGSFLRIEAV ATVMKREPPQ TEEGWYVLHD LRHVDWDAWR AAPERDRDRA LTDGIDYLEY 
FEAVEDSSEG QSAVYTVLGD KADLMILHLR PTMADLDAAE RQFEQTEFAR YTEQATSYVS
VTEASGYTEK AREYFDGEVD DDSGLAQYIQ ARLHPDIPDE EFVCFYPMSK RREPDQNWYD
LPFAERAEHI KRHGDIGRQY GGKVEQMIAG SIGFDDHEWG ITLWSDDMTH VKDLLTQMRF
DPSTSKFADF GRFYVGRRFA PSDLPAMMNG QRVPSAGANA SGATTDGRAQ PTDGDHPGTR
ETATAGQSGD AGSHGGVHPG SSAEGDHPHD GGDVASRDGE ADEASESGDG HPDGGGRPDP
GDASYEETDD LAQRLATMGL SEGEDYDAGD YGLLFYSESD AEALADEVAD LRESFDHYDR
HVATTVRAQS GRAAVVSIWT AQEAAETAAG FLGDVSGVSD TYGGRLGEGA ADEPEPTTAN
SSEEIQQQLA DANVYAGQPN GEDVFALVLY SEADPETLST EVTELTESFD HYDTHEGTAV
YEAGEPLDAA TADADQPRAA VVSLWETQSA ADTASGFLTD LPGIVGRPDE GDGFGTMGMF
YTVEPDHREE FVETFDEVGE LLDEMDGHRE TTLLANRDDV NDMFIASQWD SKEDAMAFFR
SDEFAETVQW GRTVLADRPR HVFLA