Gene Hmuk_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1230 
Symbol 
ID8410750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1170215 
End bp1170673 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content63% 
IMG OID645019562 
Productprefoldin, alpha subunit 
Protein accessionYP_003177059 
Protein GI257387286 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1730] Predicted prefoldin, molecular chaperone implicated in de novo protein folding 
TIGRFAM ID[TIGR00293] prefoldin, archaeal alpha subunit/eukaryotic subunit 5 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.720721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGCG GTGGCGGCGG TGGCGGCCAG ATGCAGCAGA TCCAGCAGGA GATCGAACAG 
ATCGAACAGG AGCAGGAAGC CATCGAAGAG GAGATCGAGT CCCTGCGCAA CGAGCAGACC
GAGATCGACG AGGCCATCGA GGCCATCGAG ACGCTCGACA GCGGCGACAC GGTGCAGGTC
CCGCTGGGTG GCGACGCCTA CCTCCGCGCC GAGATTCAGG ACATCGACGA GGTCATCGTC
TCGCTCGGTG GCGGCTACGC CGCAGAGCGC GCGGAAGCCG GAGCCATCGA CAGCCTCGAA
ACGAAGCAAG ACACCATCGA CGACCGCATC GAGGACCTCG AATCCGACAT CGCCGAGCTC
GAGACCGAGG CCGAGAAGAT GCAACAGCAG GCCCAGCAGA TGCAACAACA GCAGATGCAG
CAGATGATGC AACAGCAGGA AGAAGGCGAC GACGAGTAA
 
Protein sequence
MMGGGGGGGQ MQQIQQEIEQ IEQEQEAIEE EIESLRNEQT EIDEAIEAIE TLDSGDTVQV 
PLGGDAYLRA EIQDIDEVIV SLGGGYAAER AEAGAIDSLE TKQDTIDDRI EDLESDIAEL
ETEAEKMQQQ AQQMQQQQMQ QMMQQQEEGD DE