Gene Hmuk_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1217 
Symbol 
ID8410737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1159447 
End bp1160373 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content54% 
IMG OID645019551 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_003177048 
Protein GI257387275 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAC TCGTCACTGG TGGTGCTGGG TTCATCGGCT CGAACTTCGT CCACCACGTC 
CTCGACGAAC ACGAGGATGA TGAAGTGATC ACGCTAGACG CGCTGACGTA CGCAGGCTCG
AAGGACAATC TCGATGGCGT ACTCGACGAT CCACGCCACG AGTTTGTCGA AGGAGACATC
CGCGACCACG ATCTTGTCAC TGATCTCGTC GACGATATCG ATGCAATCGT CAACTTCGCG
GCAGAGTCCC ATGTTGACCG GTCAATTGAA GGTTCGAAAC CCTTCGTGAC GACGAATGTT
CAGGGGACGC AGACACTCCT CGACGCAGCT AACGAGGCAG ATATCGATCG CTTCCTCCAG
ATTTCGACGG ATGAAGTGTA TGGCCAGATT CTCGACGGCA AGTTTTCCGA AAACGACTCG
CTCAATCCTC GAAACCCGTA CGCTGCAACG AAGGCCGGTG CGGACCTCCT CGCACAGAGC
TTCCAGACGA CCCATGATCT TCCCGTCCTC ATCACGCGTA CCTGCAACAA CTTCGGCCCG
CGTCAACATC CCGAGAAACT CATCCCAAAA TTCATCCAGA ACGCCGACAG TGGTGAGGAG
CTGCCTGTAT ACGGCGATGG ATTGAACGTC CGTGAGTGGA TTTACGTTGA GGATAACTGC
CGAGCACTTG ATATTATTCT CCGAGAGGGT GATGTCGGCG ATGTCTACAA CATCGGGAGT
TACGCCGAGA AAACGAACCT CGAAGTCACA GAAGCGATTC TGGACGCCGT CGATGCAGAC
GACGACCTGA TCACATTTGT GGACGACCGC GCTGGCCACG ACCAGCGGTA CGCACTCGAA
ACCGAGAAGA TTGAAGCACT CGGTTGGAAA CCGGAGTACA CGTTCGAAGA GGGTCTCGAA
CGAACAGTTA ACTACTACCT CAACTGA
 
Protein sequence
MRILVTGGAG FIGSNFVHHV LDEHEDDEVI TLDALTYAGS KDNLDGVLDD PRHEFVEGDI 
RDHDLVTDLV DDIDAIVNFA AESHVDRSIE GSKPFVTTNV QGTQTLLDAA NEADIDRFLQ
ISTDEVYGQI LDGKFSENDS LNPRNPYAAT KAGADLLAQS FQTTHDLPVL ITRTCNNFGP
RQHPEKLIPK FIQNADSGEE LPVYGDGLNV REWIYVEDNC RALDIILREG DVGDVYNIGS
YAEKTNLEVT EAILDAVDAD DDLITFVDDR AGHDQRYALE TEKIEALGWK PEYTFEEGLE
RTVNYYLN