Gene Hmuk_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1021 
Symbol 
ID8410538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp975711 
End bp976148 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content67% 
IMG OID645019355 
Productdeoxyribonuclease/rho motif-related TRAM 
Protein accessionYP_003176855 
Protein GI257387082 
COG category[R] General function prediction only 
COG ID[COG3269] Predicted RNA-binding protein, contains TRAM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.225066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACT GTCCACTCGC GGACGACTGC CCCGAGTTTA GCGAGCGCAT CGAGGGGATG 
GGGTGTCAAC ACTACGGCGA CCGCGGTGGT GCCGAGTGGT GCAACCACTA CAACCAGCCG
ATCTCGGACC TGAAGAGCCA GCCGGTCAAA CTCGGCGAGG AAGTCGTCGT CGAGGTCGAC
GACATCCACG AGAGCGGTGC CGGCGTCGGC CGCACCGAGG ACGGCTTCAT CGTGATGGTC
GACGGCCTCC TCCCACCGGC GAAGGCCCGC GTCCGGATCA CGAAGGTCCG GTCGAACCAC
GCCCGCGCCG ACGAGGTCGA GCGTCTCGAA CTGGACGAGG ACGACGACGG GGAAGACGAC
GAAGACGAGG GCTATCAGGG CGACGACGAG GAGGACGACG AGCGCCTCGG TAGCCGCGAC
AACTTCTGGG GCGGATAG
 
Protein sequence
MADCPLADDC PEFSERIEGM GCQHYGDRGG AEWCNHYNQP ISDLKSQPVK LGEEVVVEVD 
DIHESGAGVG RTEDGFIVMV DGLLPPAKAR VRITKVRSNH ARADEVERLE LDEDDDGEDD
EDEGYQGDDE EDDERLGSRD NFWGG