Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1021 |
Symbol | |
ID | 8410538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 975711 |
End bp | 976148 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645019355 |
Product | deoxyribonuclease/rho motif-related TRAM |
Protein accession | YP_003176855 |
Protein GI | 257387082 |
COG category | [R] General function prediction only |
COG ID | [COG3269] Predicted RNA-binding protein, contains TRAM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.225066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACT GTCCACTCGC GGACGACTGC CCCGAGTTTA GCGAGCGCAT CGAGGGGATG GGGTGTCAAC ACTACGGCGA CCGCGGTGGT GCCGAGTGGT GCAACCACTA CAACCAGCCG ATCTCGGACC TGAAGAGCCA GCCGGTCAAA CTCGGCGAGG AAGTCGTCGT CGAGGTCGAC GACATCCACG AGAGCGGTGC CGGCGTCGGC CGCACCGAGG ACGGCTTCAT CGTGATGGTC GACGGCCTCC TCCCACCGGC GAAGGCCCGC GTCCGGATCA CGAAGGTCCG GTCGAACCAC GCCCGCGCCG ACGAGGTCGA GCGTCTCGAA CTGGACGAGG ACGACGACGG GGAAGACGAC GAAGACGAGG GCTATCAGGG CGACGACGAG GAGGACGACG AGCGCCTCGG TAGCCGCGAC AACTTCTGGG GCGGATAG
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Protein sequence | MADCPLADDC PEFSERIEGM GCQHYGDRGG AEWCNHYNQP ISDLKSQPVK LGEEVVVEVD DIHESGAGVG RTEDGFIVMV DGLLPPAKAR VRITKVRSNH ARADEVERLE LDEDDDGEDD EDEGYQGDDE EDDERLGSRD NFWGG
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