| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0879 |
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| Symbol | |
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| ID | 8410394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | - |
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| Start bp | 845635 |
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| End bp | 848322 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645019214 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_003176716 |
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| Protein GI | 257386943 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.245031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.105643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCTC GCATCACCGA TACCGATGTC GCGGCCGACG ACTTGCTCCA GGAGATCGAA
CGCAAACGCT CGCTGCGGCG GGTGGCCAGC GTCGTCGTCT CGATCGTCGG CATCCTCTTT
TCGGCCTACC AGATGTGGTT CGCCGCCCGC GGGTTCGTCT TCGCCGTCGA GTTGCCCGTC
CTCGGCGAGG TCGAACTCGC CTCCCTGCAG CTGTTGCAGA TCAACGCCAT TCACGTCGGT
TTCGCGCTCG TGCTGACGTT CCTGCTGTAC CCCGGGAGCA CGGGCGACGG GCGATTCGCG
CGGGCCTGCA GCGGACTCCG AGCGCGGACG GCCGCTCGGC TCGGCCCCGA CAGCCCGCTC
GTCTCGGCGA TGGACGCGAT CGGTGACGGA CTGGCCTGGC TGTTCGTCGA TCCCGACCTC
GACCGCGTGA CGCCGTCGGA TCTCCTCCTG ATCGCAGTCA CGGTGCTGTC GAGCGCGTAC
TTCGTCACCG ACTTCCGAGA GATCCAGCGC ATGCGCGCGC TGGGGCTGCC CGCCGGTCGG
CCGATCCAGG AGGTGTTCAC GTTCCTCGAC CCGGTTGCCG GCCTGCTCGG CCCGCTGACG
AACGTGTCCT ACGCGTTCGT CCTGGGCGTC GTCGGCGTCT TGCTCGTCCT GGAGGCGACG
CGGCGAGCGA TCAGTCTCTA TCTCGTCTTC ATCGTGGGTG CGTTCATCGT CTACGCCCGC
TTCGGCGTGT TGATCCCACA GGACGCGGCC TACGTCGGCG TCCTCTCGAT CCCGGAGCTG
ACCTGGCCCT CGATCGTCCA GAACCTCTGG TACAACACGG AGAACGGCGT CTTCGGTATT
CCGGTGACGG TGTCGGTGCA GTTCATCTAC ATCTTCATCC TCTTTGGCGC GTTCCTGGAG
ATGTCCGGGG CGGGCCAGTG GTTCATCGAT CTCGCGTACG CGGCGACGGG CACGCGCAAG
GGCGGGCCAG CGAAGGCGTC GATCCTCGCG AGTGGTTTCA TGGGGACGAT CTCCGGCTCC
TCGATCGCGA ACACGGTCAC GACCGGCGCG TTCACGATCC CGCTGATGAA ACGGTCGGGC
TACTCCCCGG AGTTCGCCGG TGGCGTGGAG TCTTCGGCCT CCTCGGGCGG TCAGATCCTC
CCGCCGGTGA TGGGTGCCGC GGCCTTCCTG ATCGTCCAGT ACACCGCGAC GCCCTTCGCC
GACGTGATCG TCGCCGCCGC GATCCCGGCC GTCGTCTTCT TTTTCGGCGT CTGGGTGATG
GTCCACTTCG AGGCCTCGCG GCTGGGTATC GGGGGGCTCG ATCCCGACTC GGTCGTCGAC
ATCCGGCGAC ACCTCTGGAC GGGCTGGTTC TACCTCGTCC CCATCTTCCT CCTGCTGTAC
TACCTCATCG GCGCTCGGCT CTCGGTCGCG CGCTCGGCGT GGTTCACGCT CGTGGCCATC
GTCGCGCTGA TCACGCTCGT CGCGGCCTAC AGCGACGAAA CGCGGGGGCG ACTCGTCGCC
CTCCTCCTGG CGCTCGGCCT GGGGCAGTTC CTCGCACAGT GGTCGACCGG CGCGCCCCTC
GTCGCCGCAC TGAGCGGCGG CGGTCCGGGC GGGCTATCGA TCGGTGGGGC CGCCGCGGCG
ACGCTTGGCA CCGTGGGCCG ACTGGCGATC GCGGCGGGCG TCCTGACACT GCTCTCGAAG
CCGCGCCTGA CCGCGTCGTG GCTCGCGCTC GATCCCGCGG TCGACGAGGC CGCCGACGGG
CTCTCGACGG CCGTCGGTCG CCCGGCGGCG GGCGACAACG GGCTCGTTCG GCTCGGTACC
TTCGTGCTCA AGTCGATGGA CAGCGGTGCC CGGACCGCGG TCCCGGTCGT CGTCGCGGTC
GCGGCTGCGG GAATCATCCC CGGCGTGATC AGCGTCTCCG GGCTGGGGCC GAACCTAGTC
GCGCTCATCC GCTCGCTGGC CGGGGGCTCG CTGGTCCTCC TGCTGGTCAT CACCGCCATC
GCGTCGATCA TCCTCGGGAT GGGGATGCCG ACGACGGTCA CCTACATCAT CCTCGTGTCG
ATGCTGGGGC CCGCGCTCGT GACCTTCGGT ATCCCCGAAC TCGCCGCGCA CCTGTTCATC
CTCTATTTCG GCGTCATCGC CGACATCACG CCGCCGGTGG CCGTCGCCGC CTACGCGGCC
TCGGGCATCG CGAAGTCGGA CCCCTTCCAG ACGGGCATCG AGGCGTTCTC GCTGTCGCTC
AACAAGGCGA TCGTCCCCTT CGCGTTCGTG CTGGTCCCCG GCATCGTCTT GCTCCGGGAG
AAGGACGACG CGGCGGAGCT ACCCCTGGGC GAGCAGTTTC GCGTCGCCAC CCCGGCCGAT
CTGCTGGATC TGGGCTGGTC GCTCCCGGAG GTGTTCGTCC CCGTCGTCGG CGTCTTCCTC
GGCGTCGTCG CGCTGGCCGG CACCGTGATC GGCTTCGTCT ACGCGCCCCT CGACCGCTGG
GAACGGGCCG GGCTGGCGGT CAGCTCGCTC CTGTTGATGG CTCCCGGGCT CCCGGTGTCG
GCCGGCTACG ACGTGACGGC GCTGCTGGGG CTCGGCGGCG GCTCGGTCTC TCTGACCGCC
GACCTGCTGC TCCGGGCCGT CGGGCTCGCG ATGCTGGTCG CGCTGCTGGC GAAGAACCGG
CGGGCGGCCC CCCGCGGCGA TTCCGGAGCG ACCGCCGACG CCGCGTAG
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| Protein sequence | MTPRITDTDV AADDLLQEIE RKRSLRRVAS VVVSIVGILF SAYQMWFAAR GFVFAVELPV
LGEVELASLQ LLQINAIHVG FALVLTFLLY PGSTGDGRFA RACSGLRART AARLGPDSPL
VSAMDAIGDG LAWLFVDPDL DRVTPSDLLL IAVTVLSSAY FVTDFREIQR MRALGLPAGR
PIQEVFTFLD PVAGLLGPLT NVSYAFVLGV VGVLLVLEAT RRAISLYLVF IVGAFIVYAR
FGVLIPQDAA YVGVLSIPEL TWPSIVQNLW YNTENGVFGI PVTVSVQFIY IFILFGAFLE
MSGAGQWFID LAYAATGTRK GGPAKASILA SGFMGTISGS SIANTVTTGA FTIPLMKRSG
YSPEFAGGVE SSASSGGQIL PPVMGAAAFL IVQYTATPFA DVIVAAAIPA VVFFFGVWVM
VHFEASRLGI GGLDPDSVVD IRRHLWTGWF YLVPIFLLLY YLIGARLSVA RSAWFTLVAI
VALITLVAAY SDETRGRLVA LLLALGLGQF LAQWSTGAPL VAALSGGGPG GLSIGGAAAA
TLGTVGRLAI AAGVLTLLSK PRLTASWLAL DPAVDEAADG LSTAVGRPAA GDNGLVRLGT
FVLKSMDSGA RTAVPVVVAV AAAGIIPGVI SVSGLGPNLV ALIRSLAGGS LVLLLVITAI
ASIILGMGMP TTVTYIILVS MLGPALVTFG IPELAAHLFI LYFGVIADIT PPVAVAAYAA
SGIAKSDPFQ TGIEAFSLSL NKAIVPFAFV LVPGIVLLRE KDDAAELPLG EQFRVATPAD
LLDLGWSLPE VFVPVVGVFL GVVALAGTVI GFVYAPLDRW ERAGLAVSSL LLMAPGLPVS
AGYDVTALLG LGGGSVSLTA DLLLRAVGLA MLVALLAKNR RAAPRGDSGA TADAA
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