Gene Hmuk_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0869 
Symbol 
ID8410384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp839847 
End bp840629 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content60% 
IMG OID645019204 
ProductABC-2 type transporter 
Protein accessionYP_003176706 
Protein GI257386933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.201874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.150559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGGCT GGGCGTCGTA CGCCAACCTG ATCCGCGTTG TTGCAAAGCG GGAACTTCTC 
GTCTATCTCA GATATCCGGT CGATACGGGC GGATTGTTAC TCGCCTATGC CCTCATTTTC
GGGGTGATCT TCCTCGGTGG CCGTGCCCTC GTCGGAGATG GGTTCGACAA GTCGCTTGAC
AGTATCGTTG TCGGATTTTT CCTCTGGACG CTTTCGACGA TCGCGTTCAT CGACGTGGGG
AAAGCGATCT GGAAGGAATC CGAGTGGGGG ACGATGGAGC GACACTTCCT CACGCCGCTG
GGATTCAACG TCGTACTCCT GACGAAGGCA CTCGCTACGC TCGTCTTCGC CGGGCTCGTT
TCGACGTTGA TGCTCCTGGG GATGCTCGTG ATCACGGGCC AACAGCTCCA GGTGGATCTC
CTCACGATCG TGCCGATCGT GCTACTGTCT GTCAGTTCGG TGTTCGGTAT CGGCTTCGCG
GTCGGTGGCA TATCGGTCCT CTACAAGAAA GTCGACAGTT GGCTCGCCCT CTGTAATTTC
GCGTTGGCTG GCCTCGTCGC TGTGCCCACG ACTGGCGTCG ACCTACTCCG ACTGCTTCCG
CTGGCTCAGG GCAGCGCCAT GCTGCAAGCG GCTATGACCG ATGGCTATCG CCTCTGGGAC
TTCGATCCCG TCTCGCTGCT GCTCTTGCTG GGGACCGGGC TGTTCTACCT TGTTGCGGGC
TATGCCGTGT TCGTCTGGTG TCAGCGCCGG GCACGACGGC TCGCCGTCCT TGGCGACTAC
TGA
 
Protein sequence
MGGWASYANL IRVVAKRELL VYLRYPVDTG GLLLAYALIF GVIFLGGRAL VGDGFDKSLD 
SIVVGFFLWT LSTIAFIDVG KAIWKESEWG TMERHFLTPL GFNVVLLTKA LATLVFAGLV
STLMLLGMLV ITGQQLQVDL LTIVPIVLLS VSSVFGIGFA VGGISVLYKK VDSWLALCNF
ALAGLVAVPT TGVDLLRLLP LAQGSAMLQA AMTDGYRLWD FDPVSLLLLL GTGLFYLVAG
YAVFVWCQRR ARRLAVLGDY