| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0700 |
|---|
| Symbol | |
|---|
| ID | 8410214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 670398 |
|---|
| End bp | 670946 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645019035 |
|---|
| Product | KH type 1 domain protein |
|---|
| Protein accession | YP_003176538 |
|---|
| Protein GI | 257386765 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1094] Predicted RNA-binding protein (contains KH domains) |
|---|
| TIGRFAM ID | [TIGR03665] arCOG04150 universal archaeal KH domain protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.432853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.977117 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACACG TGAAGATTCC GCAGGACCGC ATCGGCGTAC TCATCGGCGA AGGGGGTGAG
ACCATGCGCG AGATCGAGGA CCGAGCCGAA GTTCGCCTCG ATATCGACTC CGAATCCGGC
TCGGTGGGTG TCGAGTCCGT CGGCGACCCG ATCACGGGAC TGAAAGGCCC CGACATCGTG
AAGGCGATCG GTCGCGGCTT CAACCCGGAG GACGCGCTCG CGTTGCTGGA CGACGAGATG
ATGATGTTCG ACGTGGTCGA CATCGACGCC GCCTCTCGCA ACCAGAACGA CTTCACTCGA
CAGAAGGGAC GCCTCATCGG CGAGGGCGGT CGGACCCGGG AGCTCATGGA GGAACTCACG
GGTGCGTCTG TCGTGATCTA CGGCTCGACG CTGGGGATCA TCGGTGGTCC GGAACAGGTC
GATGCCGTCC GTGAGGCCGC CGAGATGCTG CTCGAAGGCG CACCCCACGG CTCGGTCTAC
TCCTTCCTCG AACGCAAGCA CAACGAGATG AAACAGAAGG GACTGAACTA CCACCAGTTC
CACGGGTGA
|
|---|
| Protein sequence | MQHVKIPQDR IGVLIGEGGE TMREIEDRAE VRLDIDSESG SVGVESVGDP ITGLKGPDIV
KAIGRGFNPE DALALLDDEM MMFDVVDIDA ASRNQNDFTR QKGRLIGEGG RTRELMEELT
GASVVIYGST LGIIGGPEQV DAVREAAEML LEGAPHGSVY SFLERKHNEM KQKGLNYHQF
HG
|
|---|
| |