Gene Hmuk_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0560 
Symbol 
ID8410063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp529593 
End bp530093 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content64% 
IMG OID645018887 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003176401 
Protein GI257386628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.4185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG ACGAACTCCG TCACGTTCCG ACGGGCGATG CAGGACACGC CAGCGCCGAC 
GAGCGCTTGA CCCCCCTCGT CGGCGGGCGC GACACCGAGA CGTCGTCCGA CCGATCGAGC
CGTGACGGCG TGCCAGAGAC GCTACTATCT TCGGTCGGCG AGACCCTCGC CGATGGCGAC
GCCGCAATCG ACGAGGGTCT CGTGACCCAG AGCCTGGACG AGATCCTCCT CGCGTTGATC
GCGTCTTCGA CCGATCAAAC GCACGGCACA GAGCTGATGG ACGAACTGGA GCGGTGTTTC
GACGCCCAGT TGAGCCCAGG AACGGTCTAC CCCCGACTCC ACGAGCTCGA CTCCGAGGGA
CTCCTCGAGA TGCACGAGCT CGTCCAGACC AAGCAGTACT CGATCAGCGA CGACCCCGCT
GCTCGAGACC GCATCGAACG CGCAGTGTAT CAACACCTCG CGATCGGCAT GTTCCTGCAC
GCGTCACTCG ACGACGCGTA A
 
Protein sequence
MTEDELRHVP TGDAGHASAD ERLTPLVGGR DTETSSDRSS RDGVPETLLS SVGETLADGD 
AAIDEGLVTQ SLDEILLALI ASSTDQTHGT ELMDELERCF DAQLSPGTVY PRLHELDSEG
LLEMHELVQT KQYSISDDPA ARDRIERAVY QHLAIGMFLH ASLDDA