| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0539 |
|---|
| Symbol | |
|---|
| ID | 8410041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 511124 |
|---|
| End bp | 512167 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645018865 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003176380 |
|---|
| Protein GI | 257386607 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.435279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACGC AACGAGGACG GATACAGATC AGCGGTTTCG ACACGGAACA GGTGACCGAA
CGGGAGCCAC TGTCCGACTG GACAGCGGGT GGCACCGACA GAGGCACAGA AGGTCGCTGG
CAACGCGCCT GGCGGCAGTT CAAGAGCAAC CGGACGGCGA TGATCGGGCT CTCGGTCGTC
GCGATCATGG TGGTGTTGAC GACGTTCGCT CGGCCGGTCG AGATCGCCGG CATCACCGTC
CAGCCGATCT CGCTCGCACC CTTCGAGCCC CAGAAGAGTC TCTTTCTCGA ACCCGGTTCG
AACGTCGGGG CGTACGACCC GCCGTCGCTG GCCCATCCGA TGGGGACCGA CGCCTCGGGG
CGAGACATGT TCTCTCGTGT GATGGTCGGC GGCCGCGCGA GCATCTCGAT CGGCTTCGTC
GTCGTGTTCA TCACTGCCGG CTTCGGGCTC GTCTACGGTG CCGTCGCGGG CTACTACGGC
GGCTGGGTCG ACGAGGTCAT GATGCGGATC GTCGACACGG TCTTTGCCTT CCCGGCGCTC
GTGTTGGCGC TGGTGATTAT CGCCATTCTG GGCGGTGGCT ACTGGCAACT GGTCGCGGCC
TTCGCCTTCC CCGGCTGGGC CGGCTACGCA CGGCTGATAC GCGGTGAGAT ACTCTCGGTC
AAGCAAAACC AGTACGTCAC GGCCGCCCAG GCGCTCGGTG CTCGTGACCG GTCGGTGATC
TTCAGACACA TCGTTCCCAA CGCCATCGCG CCCCTGATCG TCCAGGCGTC GCTGTCGATC
GGGACCGTCG TCATCGGCGT GGCGGCGCTT GGCTTCCTCG GTCTGGGCTT CCCGCCGGGT
ACCCCCGAGT GGGGGACGAT GCTGGACGCG ACCCGCGAGA CGCTCATCCA GGGGCCGGGC
GGTTCGATCC CGTGGTGGGC GACCGTCTTC CCCGGTGGAG CCATCTTCAT CTTCGTGATG
GCGATGAACA TGATCGGTGA CGGCGTCAAC GACGCGCTGG ACGCCCAGAG CAACGTCGAC
GTCGAACAGG GAGGCGGTAA CTGA
|
|---|
| Protein sequence | MSTQRGRIQI SGFDTEQVTE REPLSDWTAG GTDRGTEGRW QRAWRQFKSN RTAMIGLSVV
AIMVVLTTFA RPVEIAGITV QPISLAPFEP QKSLFLEPGS NVGAYDPPSL AHPMGTDASG
RDMFSRVMVG GRASISIGFV VVFITAGFGL VYGAVAGYYG GWVDEVMMRI VDTVFAFPAL
VLALVIIAIL GGGYWQLVAA FAFPGWAGYA RLIRGEILSV KQNQYVTAAQ ALGARDRSVI
FRHIVPNAIA PLIVQASLSI GTVVIGVAAL GFLGLGFPPG TPEWGTMLDA TRETLIQGPG
GSIPWWATVF PGGAIFIFVM AMNMIGDGVN DALDAQSNVD VEQGGGN
|
|---|
| |