Gene Hmuk_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0516 
Symbol 
ID8410016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp489383 
End bp489610 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content58% 
IMG OID645018840 
ProductRNA polymerase Rpb5 
Protein accessionYP_003176357 
Protein GI257386584 
COG category[K] Transcription 
COG ID[COG2012] DNA-directed RNA polymerase, subunit H, RpoH/RPB5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGACG TAAGCCAACA CGAACTCGTT CCAGACCACA GCATCGTCGA CGAGGACGTT 
CTCGACGACG TGCTCGAGGA GTACAACATC AAAAAGACGG ACCTGCCGAA GATCAAACGC
ACCGACCCGG CCACCCCCGA CGAGGCCGAG GTCGGCGACG TGATCAAGAT CGTCCGTAAT
TCGCGAACGA CCGATCAGGC AGTCGTGTAT CGACTGGTGG TGTCCTGA
 
Protein sequence
MVDVSQHELV PDHSIVDEDV LDDVLEEYNI KKTDLPKIKR TDPATPDEAE VGDVIKIVRN 
SRTTDQAVVY RLVVS