Gene Hmuk_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0336 
Symbol 
ID8409834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp331964 
End bp332851 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content70% 
IMG OID645018661 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003176180 
Protein GI257386407 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.728434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.496407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGGTC AACAGTTCGT AACGGAGTTC TCGCTGCCGG GGGTCGTCGA CGGTGGGATC 
GAACGGGTGA ACGTCGGCTC GTGGATCGGC GATTCGATCG TCGTCCTCGT GTTCTATCCC
TCCGACTTCG GGCCGCGGTC CGGACAGAGC GCCGCGCTGT TGCGCGCGGT CGACGAGCTA
ACGGGCGAGA CCGACGCCAG AGCGGTCGGG ATCGCGCCCG AGTCGGTGTA CAGTCACCGG
CGGTTCGCCG CCGAGGCAGA CGTGGACGTA GCCCTGGCCA GCGACGCCGA CGGGTCGGTC
ACAGAGGCGT ACGGGGTGGC CTCGACCGGC GAGGCCGGCC AGGTCGTCAC CGAGCGGTCG
CTGTTCGTCG TCGACTATCG CGGTGTCGTC GTCCACGAGT GGGTGGCCTC GGACACCGGC
GCGATGCCGG AGTTCGAGCG ACTGCGGACG CGGCTGCGCT CGATCACGCC CGACGGGTCC
GCACGGGGGT GTTACCGCAC CGGCTACGCC CGGTATCGCG AGGGGCGGCG CTACCTCTCT
AGCGGGCTCG AACACTGCGA GGCCGGCGAC TGGGGGCTCG CCGCCTCCGC GTTCGACGAG
GCCAGCGAGG AGTTCGGCGA CGCGACCAAC CGCTTCACGA AGGGGCAGGG ACTGGCCGAC
GGGGACGATA TCAACGAGAA CAACAGCCGA GGGCGGGTCG TCGCCACGAA GTACTGGGAG
GCCGCCGAGT GGCTCGCCGG TTTCGCCACG GCCGCGAGCA AGGACAACGT CGAGGCCCGC
GAGGAGAACC GCGAGGCTGC CGAGCAGGCA CTACGGGAGG TCCGAGACGT GACCCTCCCC
GAACCGGACG CGGCGTCGAA GACCGCCACC GGGAAACACC ACGCGTAG
 
Protein sequence
MGGQQFVTEF SLPGVVDGGI ERVNVGSWIG DSIVVLVFYP SDFGPRSGQS AALLRAVDEL 
TGETDARAVG IAPESVYSHR RFAAEADVDV ALASDADGSV TEAYGVASTG EAGQVVTERS
LFVVDYRGVV VHEWVASDTG AMPEFERLRT RLRSITPDGS ARGCYRTGYA RYREGRRYLS
SGLEHCEAGD WGLAASAFDE ASEEFGDATN RFTKGQGLAD GDDINENNSR GRVVATKYWE
AAEWLAGFAT AASKDNVEAR EENREAAEQA LREVRDVTLP EPDAASKTAT GKHHA