Gene Hmuk_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0331 
Symbol 
ID8409829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp325125 
End bp326018 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content61% 
IMG OID645018656 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003176175 
Protein GI257386402 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.654784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC AGACGAAACC ATTCGATTCC AAGCTCCAGG CAGCGGCGCT GCTACTGCCG 
ACGATCGTCG TGCTCGTCGC GTTCCTGTAC TACCCGTCAC TGGAGACGTT TCGGCTGAGC
CTGTTCGAGT CGGCGTTCCT CGGACAGGAT CTCAGGTGGA CGGGCATCGG TAACTTCGTG
GAACTGGCCA CGTCGTCGAC CTACCGCAAC AGCTTCGTGG TCTCTGTCCT GTTCGCGGGC
GTCGTCGTGA TCGGGACGCT GGTGTTGTCG CTGTTGATCA GCTACATGCT GTTCGACGTC
GACCTCGGGT CGTCGTCGTA CCTCGTCGCG GCGATCTGGC CCTACGCGCT CCCGCCCGCC
GTGGCGGCGA TCCTGCTGAA CTTCCTGCTT CACCCGAACC TCGGGATCTT CACCCACTAC
CTCGAGCTGT TGACCCCCTG GACGCTCGAC TGGTTCAACA GCGGGCCACA GGCCTTTGCC
GTGCTGGCGA TCGTCGCCAT CTGGAAGCAG CTGGGGTACA ACATCATCTT CATGGTCGCC
GCGCTCAACA ACATCCCAGA GACGCTGACC GAGAGCGCTC AGCTCGACGG AGTCGGCCGG
CTCAAGATGC TGTACAAGGT GTACGTACCG CTGATCTCGC CGACGATGAT CTTCCTCGTC
GTGATGAACA CGATCTACTC GTTCTTCTCG ACGTTCCCGC TGGTCGATCT GATGACCAGC
GGTGGCCCGA GCGGGGCGAC GAACCTGTTG ATCTTCAAGC TGTACCGCGA CGCGTTCGAG
TTCAGTAACT ACGGGCTGGC GTCCGCCGAG TCCGTTATCC TGTTCGCCCT CGTGGCGATC
CTGATGTACA TCCAGCTCAG GGCCACCGAG GGCCACGCAC AGTACGGAGC GTGA
 
Protein sequence
MAEQTKPFDS KLQAAALLLP TIVVLVAFLY YPSLETFRLS LFESAFLGQD LRWTGIGNFV 
ELATSSTYRN SFVVSVLFAG VVVIGTLVLS LLISYMLFDV DLGSSSYLVA AIWPYALPPA
VAAILLNFLL HPNLGIFTHY LELLTPWTLD WFNSGPQAFA VLAIVAIWKQ LGYNIIFMVA
ALNNIPETLT ESAQLDGVGR LKMLYKVYVP LISPTMIFLV VMNTIYSFFS TFPLVDLMTS
GGPSGATNLL IFKLYRDAFE FSNYGLASAE SVILFALVAI LMYIQLRATE GHAQYGA