Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0331 |
Symbol | |
ID | 8409829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 325125 |
End bp | 326018 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645018656 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003176175 |
Protein GI | 257386402 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.654784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAC AGACGAAACC ATTCGATTCC AAGCTCCAGG CAGCGGCGCT GCTACTGCCG ACGATCGTCG TGCTCGTCGC GTTCCTGTAC TACCCGTCAC TGGAGACGTT TCGGCTGAGC CTGTTCGAGT CGGCGTTCCT CGGACAGGAT CTCAGGTGGA CGGGCATCGG TAACTTCGTG GAACTGGCCA CGTCGTCGAC CTACCGCAAC AGCTTCGTGG TCTCTGTCCT GTTCGCGGGC GTCGTCGTGA TCGGGACGCT GGTGTTGTCG CTGTTGATCA GCTACATGCT GTTCGACGTC GACCTCGGGT CGTCGTCGTA CCTCGTCGCG GCGATCTGGC CCTACGCGCT CCCGCCCGCC GTGGCGGCGA TCCTGCTGAA CTTCCTGCTT CACCCGAACC TCGGGATCTT CACCCACTAC CTCGAGCTGT TGACCCCCTG GACGCTCGAC TGGTTCAACA GCGGGCCACA GGCCTTTGCC GTGCTGGCGA TCGTCGCCAT CTGGAAGCAG CTGGGGTACA ACATCATCTT CATGGTCGCC GCGCTCAACA ACATCCCAGA GACGCTGACC GAGAGCGCTC AGCTCGACGG AGTCGGCCGG CTCAAGATGC TGTACAAGGT GTACGTACCG CTGATCTCGC CGACGATGAT CTTCCTCGTC GTGATGAACA CGATCTACTC GTTCTTCTCG ACGTTCCCGC TGGTCGATCT GATGACCAGC GGTGGCCCGA GCGGGGCGAC GAACCTGTTG ATCTTCAAGC TGTACCGCGA CGCGTTCGAG TTCAGTAACT ACGGGCTGGC GTCCGCCGAG TCCGTTATCC TGTTCGCCCT CGTGGCGATC CTGATGTACA TCCAGCTCAG GGCCACCGAG GGCCACGCAC AGTACGGAGC GTGA
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Protein sequence | MAEQTKPFDS KLQAAALLLP TIVVLVAFLY YPSLETFRLS LFESAFLGQD LRWTGIGNFV ELATSSTYRN SFVVSVLFAG VVVIGTLVLS LLISYMLFDV DLGSSSYLVA AIWPYALPPA VAAILLNFLL HPNLGIFTHY LELLTPWTLD WFNSGPQAFA VLAIVAIWKQ LGYNIIFMVA ALNNIPETLT ESAQLDGVGR LKMLYKVYVP LISPTMIFLV VMNTIYSFFS TFPLVDLMTS GGPSGATNLL IFKLYRDAFE FSNYGLASAE SVILFALVAI LMYIQLRATE GHAQYGA
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