Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0223 |
Symbol | |
ID | 8409721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 222720 |
End bp | 223166 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645018548 |
Product | UspA domain protein |
Protein accession | YP_003176067 |
Protein GI | 257386294 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.189341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCG ACCTCGTGCT CGCGCCGGTG GACGGCTCCA ATCAGTCCGA GGCGGCCGTC GAGTACGCGC TGGCCATCGC CGACGCCTAC GACGCCGAGA TCCACCTCCT CTTTGTCCTC GACGAGACGC TGATTCGCGC GATCGAGGCC GACGAGGTCG ACGCCGACGC GATCGCCGAC CAGCATCAGG TCTTCGCAGC CGAGATGCAG TCCCGACTCG ACGACCGGGG CCACGAGGCC GGACTGAACC ACTCGACCGC CGCCGGCTTC TCGCCGACGC GGCTCCGCCA GTCCCCGGGA AGCGTCATTC TCGACGTGGC AGAGGATCTC GACGCCGACT TCATCGTCGT CCCCCGCGAG CCGGGCAGCG ACGACTCGGT GGACGCGATC GGCCGCGCGG CGCTGTACGT CATCGAGTAC GCCAGCCAGC CCGTACTCTC CGTCTAG
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Protein sequence | MDIDLVLAPV DGSNQSEAAV EYALAIADAY DAEIHLLFVL DETLIRAIEA DEVDADAIAD QHQVFAAEMQ SRLDDRGHEA GLNHSTAAGF SPTRLRQSPG SVILDVAEDL DADFIVVPRE PGSDDSVDAI GRAALYVIEY ASQPVLSV
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