| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0127 |
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| Symbol | |
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| ID | 8409624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | + |
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| Start bp | 130709 |
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| End bp | 132601 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645018452 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003175972 |
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| Protein GI | 257386199 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.887891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.131112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTG AGACGCCACG GCAGTTGAAC CCGCTCGATC GGGGACTGTA CGCTCTGTTC
GCACAGCACG CCGACAGCGG CCGCCACGAC GGTGACAGAG TCCGGTACCG GGCCGCAGAT
CTGGACGCGA GCTTCGAGCT GTATCTGGCC CGAACGTACG GACTGGCCTG GGTGGCCGGA
CTCGCCGGGT GTCTCTTCGT GCTGGTCGTC ACCGCGGCCG TCCCGCCGGC CGTCCTGGCC
GAGGTCGTCG CGTTCTTCCA GAACGGCGTG CCCATCGTCA ATCAGGTCCA CTGGCCGGTC
GTCCCGCGAC CCGTCGTCGC CGTCGGGGCC GGGCTGGTCG GCGGTGGAAC GGTGCGATTG
CTCGTCCTGC GGGCCGGCAG TACGTATCTA CGGTGGGTCG GCAAAGCACG GCGCAGCGAC
ATCGAAGCGA CCCTCCCCGG TGCCGTTCGC TACCTCCGCG TGCTCGCGTC GGGCGAACAC
GATCAGCGGG CCATGCTCGG CCGCGTCGCC GACCAGGACG CCTACGGAGA GACAGCCGTC
GCCTTCCAGC GGATCCTCAA CCGGGCTGCG CTGACCGGCA GTCTCGACGA GGGGCTGGAA
CACGTCGCCA GCGAGACGCC CTCTCGGGAT CTGCTGGCAC CGTTCCTGCT GAAGTTCCGC
GAGCACGCCA ACCAGAGCGC CGACGCGCTG GAGGGGTATC TCCAGATGGA GGGGCGGCTC
CTCTCACACG AACAGTCGCG TCGTCACGAG CGCGCGACCG GGTTTCTCGA ACTCCTGGCC
GAGCTGTTCG TCGTGTTGCT CGTCTTGCCG GCGCTGCTGG TGTTGATCGT GACGATCATG
GGCGTGCTCT CGCCGGGACT GTCAGAGCAG GTCGCCACGC CCGCGGGACC GATGACCGTT
CGGAGCGTGC TCGTCTACGG CAGTGCCGGC TTCGTCCTGG CGGCGGGCGC ATCGGCGTCG
CTGCTGGTCG CTGCGATTCG GCCACACAGC GCCAGCGCAC CGTCCTACAC CGCTCCGGCG
TCGCTCCGCT CGATCGTCGA GACGGCGAGT CGGAACCCCG CGAGCGCTGC GCGCGTGCTG
GCCCCGACGG TACCCGTCGT CGTCGCCGTC CTCGCGGGAC TCGGGTATCG GCCGGTCAAC
GTCGCCCTGC TCGCCTACGT CGCGTACGGA CTCCCGGTCG GGGCCGTCGC AGTTCGACGC
GCCAAAGTCG ACGACGCGAA AGACCGCGAG ATTCAGGACT TCGTCCACGC CGTGTCGGGC
CACGTCAGTC TGGGTCGGCC GTTCAGCGAG GCCGTCGAGC GGGTGGCCGA GGAGGTCGAT
CTGGGCGCGC TCCAGTCGGA CGTGGACCAG CTCGCGTTCA CGCTCGGCCT GACCGCCAGT
CCGGACGACG ACGCCACCGA CGGCCGGGCC GCGGCACTCG ATCGGTTCGT CGAGCGGGTC
GGGACGCCGA TGGCAGAGCA GACGATCGGG CTCGTCGTCG GCGCTCTCGA CGCCGGCAGC
GACGCCGAAG ACGTGTTCGA GACCCTCCAG ACGGAGATCG GGAAGCTCTA CCACGAGCGC
AAAGCGCTCC GCTCGTCGCT GCTCGTCTAC GTCGCCGTCG GCTGGACGAC GGCGCTGCTC
GTGGTCGGGA TCGTCGTCGC GGTCAACGCC TACGTGCTGG ACGGGTTCGC ACAGCTCTCG
ACGGTGTCCA GTGGCCCCGG CATCACGATC GATCCGACCG CCGTCGATCC GCCCCGCGAT
CGCTATCGGT TCTACGTCGT CACGCAGGCG ACGATGCTTG GCTGTGGGTG GTTCGCCGGT
ACCGCGAGCC GCGGGCGCTA CGAGGCGCTG TTACACTCGG GCGCGCTCGT CGCCGTAGCC
TACGTCGTCT TCACCGGGGC TGGGATGGTA TGA
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| Protein sequence | MATETPRQLN PLDRGLYALF AQHADSGRHD GDRVRYRAAD LDASFELYLA RTYGLAWVAG
LAGCLFVLVV TAAVPPAVLA EVVAFFQNGV PIVNQVHWPV VPRPVVAVGA GLVGGGTVRL
LVLRAGSTYL RWVGKARRSD IEATLPGAVR YLRVLASGEH DQRAMLGRVA DQDAYGETAV
AFQRILNRAA LTGSLDEGLE HVASETPSRD LLAPFLLKFR EHANQSADAL EGYLQMEGRL
LSHEQSRRHE RATGFLELLA ELFVVLLVLP ALLVLIVTIM GVLSPGLSEQ VATPAGPMTV
RSVLVYGSAG FVLAAGASAS LLVAAIRPHS ASAPSYTAPA SLRSIVETAS RNPASAARVL
APTVPVVVAV LAGLGYRPVN VALLAYVAYG LPVGAVAVRR AKVDDAKDRE IQDFVHAVSG
HVSLGRPFSE AVERVAEEVD LGALQSDVDQ LAFTLGLTAS PDDDATDGRA AALDRFVERV
GTPMAEQTIG LVVGALDAGS DAEDVFETLQ TEIGKLYHER KALRSSLLVY VAVGWTTALL
VVGIVVAVNA YVLDGFAQLS TVSSGPGITI DPTAVDPPRD RYRFYVVTQA TMLGCGWFAG
TASRGRYEAL LHSGALVAVA YVVFTGAGMV
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