Gene Hlac_3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3268 
Symbol 
ID7402414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp3003 
End bp4031 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content57% 
IMG OID643709825 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002567391 
Protein GI222481155 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCGC CCGTTCTCGA GGTGAAATGC CTCAAAAAAT ACTTCGAATC GAGTGGCTGG 
TTCAGCGATG ATCCACCGGC GAAAGCAGTC GACGGGGTCT CATTCAGTAT CGAAGAGGGC
GAGACGCTCG CGCTCATCGG GGAGTCCGGA AGCGGGAAGT CGACGATTGC CAAGACGATT
ATCGACATCC ACGAGACGAC GGATGGCCTC ATCCGGTACC AAGGAGAGGA CATCACGAAT
CCGATCTCGG ACCAAATGGA GACGATTCGT TCGGACATCC AGCTCGTGTT TCAGGATCCG
ACGTCGTGTC TGAACCCACG GCGAACGATT CGGAAGACAC TCTTGGTACC ACTGAAAGCC
ACCGGCGTTC CGACGGAGAA CCGAGAGGCA CGCGTAAGCG AGATGCTCGA ACGAGTTGGA
CTCACCGACG AGTACCTCCA TAAGTATCCA CACGAACTGA GCGGCGGACA GAAACAGCGT
GTCAACATTG CGCGGGCACT CGCTGTCGAG CCGAAACTCC TGATCCTCGA CGAGCCCACG
AGCGCACTCG ACGTCTCGGT GCAAGCCAAG ATCATCAACC TGCTCGATGA CTTACAGGAT
GAACTCGATC TGACCTACCT GTTCATTACA CACGACCTCT CGCTCGTCAG GAATTTCGCT
GACGAGACGG CCGTGATGTA CCTCGGTAAG ATCCAAGAAC AGGGACCAAC CGAAGAGATA
TTCGAGTCTC CACGGCACCC CTACACGCGC GCACTTCTCT CGTCCATTCC CGTGACATCG
GAACGCGACG AGGCGTACAG ACCTGAGAGT GAACCGCTAC GCGGTGAAGT CCCGAGCCCA
CGGGATGTCC CGTCTGGTTG TCGGCTTCAC CCACGCTGTC CGCATGCCAC GGATGAATGT
TCGATGCACG ATCCAGAGAC ACAGTCTATA GACGATGTTG ATATTACCTG TATAGCGTAT
GAAGACGACA CCGACGGATT CGACGCGCTC CTCGACGGCA CGAACGACAC GCCGGGGGGC
TCTCCATGA
 
Protein sequence
MTAPVLEVKC LKKYFESSGW FSDDPPAKAV DGVSFSIEEG ETLALIGESG SGKSTIAKTI 
IDIHETTDGL IRYQGEDITN PISDQMETIR SDIQLVFQDP TSCLNPRRTI RKTLLVPLKA
TGVPTENREA RVSEMLERVG LTDEYLHKYP HELSGGQKQR VNIARALAVE PKLLILDEPT
SALDVSVQAK IINLLDDLQD ELDLTYLFIT HDLSLVRNFA DETAVMYLGK IQEQGPTEEI
FESPRHPYTR ALLSSIPVTS ERDEAYRPES EPLRGEVPSP RDVPSGCRLH PRCPHATDEC
SMHDPETQSI DDVDITCIAY EDDTDGFDAL LDGTNDTPGG SP