Gene Hlac_3267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3267 
Symbol 
ID7402413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand+ 
Start bp1915 
End bp3006 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content62% 
IMG OID643709824 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002567390 
Protein GI222481154 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGAG ATCCACTTCT TGATGTCACC GATCTCTCGG TCGGCTTCGA CGGCTTCGAT 
GGCTACGCCG ACGTCGTCGG CAACGTCGAC CTCCGGGTCG ACCGCGGCGA GGTCGTCACC 
ATCGTCGGCG AGACTGGCTG TGGAAAATCC GTCACGACAA AAGCCATCAC CGGGCTGCTG 
GACGAGCCGC CGGCGCATGT CGACGGCAGC GTTGAGTTCG ACGGGATGGA TATCCGGGCG 
CTCTCGGACG CCGAACGGAA CGACCTGAAC GGCGACCGAC TCGGGATGAT CTTCCAGAAT 
CCCCTTTCGA GTCTCAACCC CGTGTTCACC GTCGGCGAGC AGCTCACCGA CACCGCCCAG 
TTCGGCGGCA ACAAGGATGG AGGCATCCTC TCGTACTTCC GGCAGCGCCA CAACAAGGCC 
GACCGCGAGG GTGCACGTGA ACGCGTCTTG GAGATGCTTC GAGAGGTCCA GATGCCGGAT 
CCCGAAGCAG TGATCGACAG CCACCCTTCG GAGCTTTCCG GCGGGATGCG CCAGCGGGCG 
CTCATCGCAC AGGCACTGCT TAATGAGCCG GACCTACTTA TCGCTGATGA ACCCGGATCC 
GCGCTTGACG TTACCGTCCA TGACCGGATC CTCTCGCTGC TCACGGACAT CATCGAAGAA 
CGGGACATGA GCATCCTGAT GATCACCCAC GACCTCGGCG TCGCCCGTGA AATAAGCGAT 
CGCATCTACA TCATGTATGG TGGCCGTATC GTCGAGGCAG CGCCGACCGA GGAGATCTTC 
GAAGACGCAC GCCACCCCTA CACGCAGGGA CTTATCGCAT CCATTCCACG GCTCTCGGGT 
ACACAGATGG CCAGCGGTAT CGACGGCTCT GTGCCGGAGT ACACCGATCC ACCGTCTGGC 
TGTCGCTTCC ATCCACGCTG TCCGTATGCT GACGATGACT GCCGCGGTGC GGAGCCGTCA 
CGCACGTCGT TCGGCTCGGA CTCCCATGCA GTCTGTGTCC GCCACAGCGA CGACGGCCCG 
ACTCCGACGA TCGAGGGAAC CAAGCACCGA CTGATGACGA ACGAGGCTGA CGGGACGGAG 
GAAGACCCAT GA
 
Protein sequence
MSRDPLLDVT DLSVGFDGFD GYADVVGNVD LRVDRGEVVT IVGETGCGKS VTTKAITGLL 
DEPPAHVDGS VEFDGMDIRA LSDAERNDLN GDRLGMIFQN PLSSLNPVFT VGEQLTDTAQ 
FGGNKDGGIL SYFRQRHNKA DREGARERVL EMLREVQMPD PEAVIDSHPS ELSGGMRQRA 
LIAQALLNEP DLLIADEPGS ALDVTVHDRI LSLLTDIIEE RDMSILMITH DLGVAREISD 
RIYIMYGGRI VEAAPTEEIF EDARHPYTQG LIASIPRLSG TQMASGIDGS VPEYTDPPSG 
CRFHPRCPYA DDDCRGAEPS RTSFGSDSHA VCVRHSDDGP TPTIEGTKHR LMTNEADGTE 
EDP