Gene Hlac_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3025 
Symbol 
ID7399001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp284133 
End bp285425 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content60% 
IMG OID643706834 
Producthypothetical protein 
Protein accessionYP_002564456 
Protein GI222475935 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGCG TAACGACACC AGGGAGTGAC CGAGACTGGG AGGACGTCGA CGACGTCTCG 
TGGACTCTTC TCGATCTCGA AGAACTCGTC GACGCGTACT GGGCTGTTGT CGCCCCGATG
ATGGAGACAG ACGAGCTCGA TCCAAAACGA GAAAAACCGA CACACAGCTG GCTCCGCGAC
CATGGCTTCC GGCCGCTCCT CTACGCCCTG CGGGAGTACC ACGACAGGAC CTTCGCAGAG
TTTTGGCGTG AGGATCTCGG GGCCGAGGCC GTAGAATCGG GTTACGACTG GGCGACCGAC
CACGAACGGA CTATCGAGGC ACTCGAGTCC TTCCTCACGT CACGGCGGAA GCGGAAGGGG
CTCGCGGACT CGTCGATAGA TACCCTCCGC TACCGATTGA ACCGCTACGT CGCCGCCTAC
TGTGAAGAGA ATGGAACCGA CGACCTTGTG ACACCCGTCG CCCGGGAGGG CGATGTCCCA
GCTTACAAAG CAGTTGATGC GTGTTGGGCG GCGTTCGACC GGCTGCATGT GGATCTCGAC
GGTGGACAAA CCAAACGCCG GATTCATCTC GCGGTCTCGA ACTGGTATGC GCATTTAGTG
CGTCGGAAGT GGGCTGCGGT GAACCCCGCT GACGGCCTCG ACGACGAGTT CGATTGGTCG
AACGGCGATG ACGACGATAC GGATACACCA TGTCTCGCCA CCGAGCACGT TCGCGCACTC
TACAATGCGG CAGACGACCA GGAGAACCGC CTCCTGGTAC TCGCCCTGTG TGCATGGGGT
CTTCGTCCGA ATGAGGTGGC CAGCCTACGA GTACGCCAAT TCGTTCTTGA CATCTCTACC
GACGAAGTTC CGTATATTAC GTTCGAGGAG CGGAAGAATG GGCCCGGCGA GGTGTCGCTA
CTCTACGGTA AAGAGGTACT CGAAGACCGC ATTGCAATGT TCGCCGATCA CGAGGAGTGG
GATGGCTATC TGTTTCCGTC GCCACACGCC TCAGGCGGCC CGATTTCCCG GTGGACAGTC
TGGAATCGCT TTACCCAACT CGCTGAGCAA GCGGGTCTGC CTGACGAAAT TGGTGGTGTA
TCCCCCTCGC CAAAGATGGG GCGACGCTTC TGGTATGACG CCTATTCCTC GTCACTCGAC
GTCGTCCTCG GAAGCCTCGA CGAGATTGCG GCCGAACAAG GAAGCGCGAG TGCCGACGTC
GTATTGCAAA ATTACCTCTC AGATTCGCGG GCCCGGAAGC TCCGTCGAGA GTATATGCGT
GACCAGCTAG CTGCCGCCTT CGAGGAGGGT TGA
 
Protein sequence
MSGVTTPGSD RDWEDVDDVS WTLLDLEELV DAYWAVVAPM METDELDPKR EKPTHSWLRD 
HGFRPLLYAL REYHDRTFAE FWREDLGAEA VESGYDWATD HERTIEALES FLTSRRKRKG
LADSSIDTLR YRLNRYVAAY CEENGTDDLV TPVAREGDVP AYKAVDACWA AFDRLHVDLD
GGQTKRRIHL AVSNWYAHLV RRKWAAVNPA DGLDDEFDWS NGDDDDTDTP CLATEHVRAL
YNAADDQENR LLVLALCAWG LRPNEVASLR VRQFVLDIST DEVPYITFEE RKNGPGEVSL
LYGKEVLEDR IAMFADHEEW DGYLFPSPHA SGGPISRWTV WNRFTQLAEQ AGLPDEIGGV
SPSPKMGRRF WYDAYSSSLD VVLGSLDEIA AEQGSASADV VLQNYLSDSR ARKLRREYMR
DQLAAAFEEG