Gene Hlac_2867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2867 
Symbol 
ID7399103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp126731 
End bp127549 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content67% 
IMG OID643706687 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002564313 
Protein GI222475792 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGGAC GGTTCGCCGG TGAGACCGTG ATCGTCACGG GGTCGACGCG CGGGATCGGT 
GCCGGTGTCG CAGAGCGGTT CGCCGCCGAG GGAGCGAACG TCGTGGTCAG CGGCCGCACT
GCGGAGGCCG GCGAGGCCGT CGCCAGGCGG ATATCGGAGT GGACCACGGA CGAGACGACC
GACGATCCAC AGACTGGTGA CGCGACGTTC GTTCGCGCCG ATATGCGCGA TCCGGACGAC
GTGGCTGCGT TAGCAGAGGC GGCCGCCGAA CGCTACGGGT CTGTCGACGT GCTCGTGAAC
AACGCCGGTG TACAGACCGA AACGGCTGCC GACGAGGCGA CGCTCGACGA CTGGGCGTTC
GTCGTCGAGA CGGACTTCCG GGCATACTGG CTCGCTGCAC GGGCCGCCCT CGAACACATG
GATCGCGGAG CGATCGTGAA CATCTCCTCA AACCATGCCT ACGCCACGAT GCCTGCACAT
TTCCCGTATA ACGCGGTGAA GGCGGGCATC AACGGCATGA CGCGATCGCT CGCTGTCGAC
TTCGGCCCCC GCGTCCGGGT GAACACGGTC GTCCCCGGCT GGGTGGAAAT TGAGCGGACG
CGCGAGGAAC TTCCGGAGGG ACGATTTGAG GAAGTCGAAT CGATCCACCC GACTGGTCGG
ATCGGCACGC CGTCCGACGT CGCCGGAGCC GTGTCGTTCC TCGCGAGCGA GGATGCCGCC
TTCGTCACAG GGGGTGCGCT GCTTGTCGAC GGCGGTCGCG GAGCAGTGAT GCAGGATGAC
ACGCTCCCAG ACTACCGGGC GCGAGAGCGC TCGGAGTAG
 
Protein sequence
MPGRFAGETV IVTGSTRGIG AGVAERFAAE GANVVVSGRT AEAGEAVARR ISEWTTDETT 
DDPQTGDATF VRADMRDPDD VAALAEAAAE RYGSVDVLVN NAGVQTETAA DEATLDDWAF
VVETDFRAYW LAARAALEHM DRGAIVNISS NHAYATMPAH FPYNAVKAGI NGMTRSLAVD
FGPRVRVNTV VPGWVEIERT REELPEGRFE EVESIHPTGR IGTPSDVAGA VSFLASEDAA
FVTGGALLVD GGRGAVMQDD TLPDYRARER SE